Lysobacter yananisis: RDV84_23605
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Entry
RDV84_23605 CDS
T09342
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lya
Lysobacter yananisis
Pathway
lya03030
DNA replication
lya03430
Mismatch repair
lya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RDV84_23605
03430 Mismatch repair
RDV84_23605
03440 Homologous recombination
RDV84_23605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lya03032
]
RDV84_23605
03400 DNA repair and recombination proteins [BR:
lya03400
]
RDV84_23605
Enzymes [BR:
lya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RDV84_23605
DNA replication proteins [BR:
lya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RDV84_23605
DNA repair and recombination proteins [BR:
lya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RDV84_23605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Motif
Other DBs
NCBI-ProteinID:
WMT02912
UniProt:
A0ABY9P7B8
LinkDB
All DBs
Position
complement(5736280..5737251)
Genome browser
AA seq
323 aa
AA seq
DB search
MSAVFAPWQRRIYDQAQASIGAGRLGHGLLFCGPAELGKRAVAQRLAEGLLCRERLSDGG
PCGRCRSCLLLAAGTHPDYQLVSFVPNKEGTKLRSEIVIEQIRNLSERLALTPQYGGAQI
AIIDPADAINTAACNALLKTLEEPVPGRYLWLVSSHPARLPATIRSRCQRLEFRLPPQDE
ALAWLKAQGHADAAAREAFDAARGHPGLAHEWLTGDGLKLRREVAADLAKLGRGETSAPE
VAQRWVGDEHAVLRLRHASDIALAEASAGLTDPARARSLASWFDRANRTRELLRTTVRAD
LAVTELLMAWRSDEARRAGGGRA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgttttcgcgccgtggcaacggcgcatctacgaccaggcccaggcctccatc
ggcgccggccggctcggccacggcctgttgttctgcggcccggccgaactgggcaagcgc
gcggtcgcgcagcggctcgccgagggcttgctgtgccgcgagcgcctgtccgacggcggc
ccctgcggccgttgccgcagctgcctgctgctggccgcgggcacgcatccggattaccaa
ctggtcagcttcgtgccgaacaaggaaggcaccaagctgcgcagcgaaatcgtgatcgaa
cagatccgcaacctgtccgaacggctggcgttgacgccgcagtacggcggcgcgcagatc
gcgatcatcgacccggccgacgcgatcaacaccgccgcctgcaacgcgctgctcaagacc
ctggaagaaccagtgccgggccgctacctgtggctggtgagctcgcacccggcgcggctg
ccggcgaccatccgcagccgctgccagcgcctggaattccgcttgccgccgcaggacgag
gcgctggcctggctcaaggcccagggccatgccgacgcggccgcgcgcgaggccttcgat
gcggcgcgcggccatcccggattggcgcacgaatggttgaccggcgacggcctcaagctg
cgccgcgaagtcgccgccgacctggccaagctcggccgcggcgaaacctccgcgcccgaa
gtcgcgcagcgttgggtcggcgacgagcatgcggtgttgcgtctgcgacacgcgtcggac
atcgcgctcgccgaagccagcgccggcttgaccgacccggcgcgcgcgcgcagtcttgcg
tcctggttcgaccgggccaaccggacccgcgaactgctgcggaccacggtccgcgccgat
ctggcggtcaccgaattgttgatggcctggcgcagcgacgaagcgcgccgcgccggggga
ggaagggcatga
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