Lysobacter yananisis: RDV84_23720
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Entry
RDV84_23720 CDS
T09342
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lya
Lysobacter yananisis
Pathway
lya03030
DNA replication
lya03430
Mismatch repair
lya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RDV84_23720 (dnaX)
03430 Mismatch repair
RDV84_23720 (dnaX)
03440 Homologous recombination
RDV84_23720 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lya03032
]
RDV84_23720 (dnaX)
03400 DNA repair and recombination proteins [BR:
lya03400
]
RDV84_23720 (dnaX)
Enzymes [BR:
lya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RDV84_23720 (dnaX)
DNA replication proteins [BR:
lya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RDV84_23720 (dnaX)
DNA repair and recombination proteins [BR:
lya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RDV84_23720 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_assoc_2
AAA_14
DNA_pol3_tau_5
AAA_18
Mg_chelatase
AAA_30
AAA_7
PIF1
nSTAND3
TsaE
AAA_19
AAA_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WMT02935
UniProt:
A0ABY9PA95
LinkDB
All DBs
Position
complement(5756879..5759251)
Genome browser
AA seq
790 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALTNALSTGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGECNACRDIDAGRFIDLLEIDAASNTGVDDVREVIDNAQYMPSRGRV
KVYLIDEVHMLSKSAFNALLKTLEEPPGHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
QQIAGQMTRILAAEAIPVEDAAIRQLAKAADGSLRDGLSLLDQAIAYSGAGSAGVAGGEQ
ALQGAAVAAMLGSVDRTRVGAVLSALAEGDGRRLLDEVATLAEFSPDWGNVLESLGDALH
RIQVRQLVPDAAVEADGVDVDGLAAQLRPELVQLWYQMSLGGRRDLPLAPSPRAGFEMSV
LRMLAFRPGAGGDAAPPSGSGGRGEPARAANAAAQAAAAMREMGGGPRTAAAEAAPPALA
VREARPAYVAGEHASDDAPPWAPQEPATAPAGSVSAPKPAAALKPATEPPANPMREAAPA
RALPAMSNPFEDAPRDAAPVAAPKPAPPVRANPFEDAARDAAPVVASKPAPPARANPFED
AAPVAASKPAPPTRANPFEDAPRDAAPAAAPKPAPSAPANPFEDDPRDADQLATASSARG
PMFEDDPRDAPPPRAAVAPPVPVAPPAPAAREDILAPAEPITMPARAAAPAGAAAIADDG
AWHALIDGSGLRGPARILAEHAAFLGYAGGVLTLALGPNDEHLKAPALIKLVADALAAPL
GAPPQIRFETAADSAGHGNGESVHARNLRARDERQARAEDVFMNDPDVRRLIEQYGARLV
PDSIRPFDEA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgtcctcgcccgcaaatggcgccccaagcgtttcgccgaactggtcggg
caggagcacgtggtgcgcgcgctgaccaacgcgctgagcaccggacgcgtgcaccacgcc
ttcctgttcaccggcacccgcggcgtgggcaagaccacgatcgcgcgcattttcgccaag
tcgctcaactgcgagcagggcacctcggccgatccgtgcggcgagtgcaacgcctgccgc
gacatcgacgccggccgcttcatcgaccttctggaaatcgacgcggccagcaacaccggc
gtggacgacgtgcgcgaggtgatcgacaacgcgcagtacatgcccagccgcggacgggtc
aaggtctacctgatcgacgaagtccacatgctgtccaagtcggccttcaacgccttgctc
aagacgctggaagagccgccggggcacgtcaagttcctgctcgccaccaccgacccgcag
aagctgccggtgacggtgctctcgcgctgcctgcagttcaatctcaagcgtctggacgag
cagcagatcgccgggcagatgacccggatcctcgcggccgaggcgatcccggtcgaggat
gcggcgatccgccagctggccaaggccgccgacggcagcctgcgcgacggcctgtcgctg
ctcgaccaggccatcgcctacagcggcgccggcagcgcgggcgtcgccggcggcgagcag
gcgctgcagggcgcggcggtggcggcgatgctcggctcggtcgaccgcacccgcgtcggc
gcggtgctgtcggcgctggccgaaggcgacggccgccgtctgctcgacgaagtggcgacc
ctggccgagttctcgcccgattggggcaacgtgctcgaatcgctcggcgacgcgctgcac
cggatccaggtgcggcagctggtgccggacgcggcggtcgaggccgacggcgtcgatgtc
gacggcctcgccgcgcaactgcggcccgagctggtgcagctgtggtaccagatgagcctg
ggcggccgccgcgacctgccgctggcgccgagcccgcgcgcgggtttcgagatgagcgtg
ctgcgcatgctcgcgttccggcccggcgcgggcggcgatgccgcgccgccgtcgggctcg
ggcggtcgcggcgaaccggcgcgcgcggccaatgccgcggcgcaggcggccgcggcgatg
cgcgagatgggcggcgggccgcgcacggccgcggccgaggcggcgccgcccgcgctggcg
gtgcgcgaagcgcgcccggcctatgtcgccggcgagcacgccagcgacgatgcgccgccg
tgggcgccgcaggagccggcaacggcgcccgccggcagcgtgtccgcgccgaagcccgcg
gccgcactgaagcccgcgaccgagccgcccgcgaatccgatgcgcgaggccgcgcccgca
cgcgcgttaccggcgatgtccaacccgttcgaggacgccccgcgcgacgcagcgccggtc
gcggcgccgaagcccgcgccgccggtccgcgccaatccgttcgaggacgccgcgcgcgac
gcggcgccggtcgtggcgtcgaagcccgcgccgccggcccgcgccaacccgttcgaggac
gctgcgccggtcgcggcgtcgaagcccgcgccgccgacccgcgccaacccgttcgaggac
gccccgcgcgacgcagcgccggccgcagcaccgaagcccgcgccatcggctcccgccaat
ccattcgaagacgacccgcgcgatgccgaccagctcgccaccgcatcgtccgcgcgcggc
ccgatgttcgaggacgacccgcgcgacgcgccgccgccgcgcgcggccgtggcgccgccc
gtgcccgtcgcgccgccggcgcccgccgcgcgcgaggacatcctcgctccggccgaaccg
atcaccatgcccgcgcgcgccgccgcgccggccggcgccgccgccatcgccgacgacggc
gcctggcacgcgctgatcgacggcagcggcctgcgcgggccggcccggatcctggccgag
cacgccgccttcctcggctatgccggcggcgtgctgaccctggcgctgggcccgaacgac
gaacacctcaaggcgccggcgctgatcaagctggtcgccgacgcgctggccgcgccgttg
ggcgcgccgccgcagatccgcttcgagaccgcggcggacagcgccggccacggcaacggc
gagtcggtgcacgcgcgcaacctgcgcgcgcgcgacgagcgccaggcgcgggccgaggac
gtgttcatgaacgatccggacgtgcgccggctgatcgagcaatacggcgcccggctcgtg
cccgattcgatccgcccgttcgacgaagcctga
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