Lysobacter yananisis: RDV84_23955
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Entry
RDV84_23955 CDS
T09342
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lya
Lysobacter yananisis
Pathway
lya03030
DNA replication
lya03430
Mismatch repair
lya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RDV84_23955 (dnaQ)
03430 Mismatch repair
RDV84_23955 (dnaQ)
03440 Homologous recombination
RDV84_23955 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lya03032
]
RDV84_23955 (dnaQ)
03400 DNA repair and recombination proteins [BR:
lya03400
]
RDV84_23955 (dnaQ)
Enzymes [BR:
lya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RDV84_23955 (dnaQ)
DNA replication proteins [BR:
lya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RDV84_23955 (dnaQ)
DNA repair and recombination proteins [BR:
lya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RDV84_23955 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WMT02976
UniProt:
A0ABY9P7K7
LinkDB
All DBs
Position
complement(5804618..5805352)
Genome browser
AA seq
244 aa
AA seq
DB search
MRQIILDTETTGLSWERGNRVVEIGCVEFVERRPTGRTYHQYIKPDCDFEAGAQEVTGLS
LERLAGEPPMEQVVEAFLEFIRGAELIIHNAAFDVGFLNNELSICGAQYGKLADHVTGIE
DSLLMARQRFPGQRNSLDALCKRLGVDNSHRQLHGALLDAQILGEVYIALTSGQEEIGFG
DPAATAAQEGPVSVRVDLSAPRPRVVVPAAELAAHQARLEKLRKKAGKCVWDLIDPPVAA
AAEA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaatcatcctggataccgaaaccaccggcctgagctgggagcgcggcaaccgc
gtggtcgaaatcggctgcgtcgagttcgtcgagcgccgccccaccggccgcacctaccac
caatacatcaagcccgattgcgacttcgaggccggcgcgcaggaagtcaccggcctgtcg
ctggagcggctggcgggcgagccgccgatggagcaggtggtcgaggcgttcctggagttc
atccgcggcgccgagctgatcatccacaacgcggccttcgacgtcggcttcctcaacaac
gagctgtcgatctgcggcgcgcagtacggcaagctcgccgaccacgtcaccggcatcgaa
gactcgctgctgatggcgcgccagcgcttccccggccagcgcaattcgctcgacgcgttg
tgcaagcgcctgggcgtggacaactcgcaccgccagttgcacggcgccttgctcgacgcc
cagatcctgggcgaggtctacatcgcgctgacctcgggccaggaggagatcggcttcggc
gatccggccgcgacggcggcgcaggaagggccggtcagcgtgcgggtcgacctgagcgcg
ccgcgtccgcgcgtggtggtgccggcggcggaactggccgcgcatcaggcgcggctggag
aagctgcgcaagaaggccggcaagtgcgtgtgggacctgatcgatccgccggtggcggcg
gccgccgaggcttga
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