Lysobacter yananisis: RDV84_24425
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Entry
RDV84_24425 CDS
T09342
Name
(GenBank) phospholipase C, phosphocholine-specific
KO
K01114
phospholipase C [EC:
3.1.4.3
]
Organism
lya
Lysobacter yananisis
Pathway
lya00562
Inositol phosphate metabolism
lya00564
Glycerophospholipid metabolism
lya00565
Ether lipid metabolism
lya01100
Metabolic pathways
lya01110
Biosynthesis of secondary metabolites
lya02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
RDV84_24425
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
RDV84_24425
00565 Ether lipid metabolism
RDV84_24425
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RDV84_24425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
lya02042
]
RDV84_24425
Enzymes [BR:
lya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.3 phospholipase C
RDV84_24425
Bacterial toxins [BR:
lya02042
]
Type II toxins: Membrane damaging toxins
Toxins that enzymatically damage the membrane
RDV84_24425
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GFIT
Motif
Pfam:
Phosphoesterase
PLipase_C_C
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WMT03062
UniProt:
A0AA51SE49
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Position
5906498..5908588
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AA seq
696 aa
AA seq
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MTDQHDTSRRGFLRGAAGATAAGLALNLFPPSIQKALAIPAARVTGTLHDVQHVVILMQE
NRSFDHYFGAMRGVRGFGDRFPIPLPGGKPVWRQTDAKGREIQPWHIDTKTTSAQRIGGT
PHTWPDAQAAWNQGKMDQWLPAKTERSMGHYLEADIPFQYALANAFTLCDAYHCSQLTGT
NPNRLFLWTGTNNPAADRGGPAIVNTFDDSGPAGEGYFWTTYPERLERAGVSWKLYQDMD
DNFSDNPLEGFRQYRAAAPGSALAEKALKTWTLEDLADDVRSGKLPQVSWLVAPAKYSEH
PGPSAPIWGADYTARVLDALTADPAVWARTVLIVNFDENDGFFDHMPPPAPPALDAQRKP
LGGSTVDLRGEHHFARTGPSHGTSADPAVYYDRPYGLGPRVPMYAISPWSRGGWINSQVF
DHTSVIRFLEKRFGVIEPNISPWRRAVCGDLTTAFNFENPNNEPIPTLPYTGDADRIVAE
QSKLPAPKPPATPSAARQDAGIKPSRALPYDLHVGERFDRDARSLRLSFGNSGRAAAVFH
VYDLLDPDAVPRRYTIEPGRSLNGDWPLRSGGERAYALQVFGPNGFYREFRGSLHGANPS
ATTIPDLRVRHRKLVLALRNPGRKPLRLELVDQYGLYDRRLERLGAGSLRYRPIRLDESC
QWYDFVLTDANDPEYFRRIAGRVETGAHGITDPGLL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccaacacgacacctcgcgccgcggcttcctgcgcggcgccgccggcgcgacc
gccgccggcctcgccctcaacctgttcccgccgtcgatccagaaagcgctggcgattccc
gccgcgcgcgtcaccggcaccctgcacgacgtccagcacgtggtgatcctgatgcaggag
aaccgctccttcgaccattacttcggcgcgatgcgcggcgtgcgcggtttcggcgaccgc
ttcccgatcccgctgcccggcggcaagccggtgtggcgccagaccgacgccaagggccgc
gaaatccagccctggcacatcgataccaagaccaccagcgcgcagcgcatcggcggcacg
ccgcacacctggcccgacgcccaggcggcctggaaccagggcaagatggaccagtggctg
ccggccaagaccgagcgctcgatgggccactacctggaagccgacattccgttccagtac
gcgctcgccaacgccttcaccctgtgcgacgcctaccactgctcgcagctgaccggcacc
aatcccaaccgcctgttcctgtggaccggcaccaacaacccggccgccgaccgcggcggc
ccggccatcgtcaacaccttcgacgactccggcccggccggcgaaggctatttctggacc
acctatcccgagcggctggagcgcgccggggtcagctggaagctgtaccaggacatggac
gacaacttctccgacaaccccttggaaggctttcgccagtaccgcgcggccgcgccgggt
tcggcgctggcggaaaaggcgctgaagacctggacgctggaggatctggccgacgacgtg
cgcagcggcaagctgccgcaggtgtcgtggctggtcgcgccggccaagtattccgagcac
cccggtccgtcggcgccgatctggggcgcggactacaccgcgcgcgtgctcgacgcgctc
accgccgatcccgcggtgtgggcgcgcaccgtgctgatcgtcaatttcgacgagaacgac
ggcttcttcgaccacatgccgccgccggcgccgccggcgctggacgcgcagcgcaagccg
ctcggcggctccaccgtcgacctgcgcggcgagcaccacttcgcccgcaccggcccctcg
cacggcacctccgccgacccggcggtctactacgaccgtccctacggcctgggcccgcgc
gtgccgatgtacgcgatctcgccgtggagccgcggcggctggatcaattcgcaggtgttc
gaccacacctcggtgatccgcttcctggaaaagcgcttcggcgtgatcgagccgaacatc
agcccgtggcggcgcgcggtctgcggcgacctgaccaccgcgttcaacttcgagaacccg
aacaacgaaccgatcccgaccctgccctacaccggcgacgccgaccgcatcgtcgccgag
cagagcaaactgcccgcgcccaagccgccggcgacgccgagcgcggcgcggcaggacgcc
ggcatcaagccctcgcgcgcgctgccgtacgacctgcacgtgggcgagcgcttcgaccgc
gacgcgcgctcgctgcgcctgagcttcggcaacagcggccgcgccgccgcggtgttccac
gtctacgacctgctcgatcccgacgcggtgccgcgccgctacaccatcgaacccggccgc
tcgctcaacggcgactggcccttgcgcagcggcggcgagcgcgcctacgcgctgcaagtg
ttcgggccgaacggcttctaccgcgaattccgcggctcgctgcacggcgccaatcccagc
gcgaccacgatccccgacctgcgcgtgcgccaccgcaagctggtgctggccttgcgcaac
ccgggccgcaagccgctgcggctggaactggtcgaccagtacggcctgtacgaccggcgc
ctggagcggctcggcgcgggctcgctgcgctaccggccgatccggctcgacgagagctgc
cagtggtacgacttcgtgctgaccgacgcgaacgatccggagtatttccgccgcatcgcg
gggcgggtggagaccggcgcgcacgggatcaccgacccggggttgctgtga
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