Lysobacter yananisis: RDV84_24760
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Entry
RDV84_24760 CDS
T09342
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
lya
Lysobacter yananisis
Pathway
lya00541
Biosynthesis of various nucleotide sugars
lya01100
Metabolic pathways
lya01250
Biosynthesis of nucleotide sugars
Module
lya_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RDV84_24760 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lya01005
]
RDV84_24760 (kdsA)
Enzymes [BR:
lya01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RDV84_24760 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
lya01005
]
Lipid A
RDV84_24760 (kdsA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
WMT03127
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Position
complement(5977877..5978710)
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AA seq
277 aa
AA seq
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MKLCGFDVGLDQPFFLIAGPCVIESMQLQLDVAGQLKEITSALGIPFIFKSSFDKANRTS
ATSFRGPGLEEGLKVLAEVKRQIGVPVLTDVHEYTPMAEVASVVDVLQTPAFLCRQTDFI
QNVARAGKPVNIKKGQFLSPWEMKHVTAKAKATGNEAIMACERGASFGYNNLVSDMRSLS
VMRDTGCPVVFDATHSVQLPGGMDGKSGGQREFVPVLARAAIAVGVSGVFMETHPKPEEA
LSDGPNAVPLPKMRGLLETLVELDRITKKNGFLEQDF
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctgcggcttcgatgtcggcctggaccagccgttcttcctgatcgccggcccc
tgcgtgatcgaatcgatgcagttgcagctcgacgtcgccggccagctcaaggagatcacc
tccgcgctcggcattcccttcatcttcaagtccagcttcgacaaggccaaccgcacctcg
gcgacgagcttccgcggcccgggcctggaggaaggcttgaaggtgctggccgaggtcaag
cgccagatcggcgtgccggtgctgaccgacgtgcacgaatacacgccgatggccgaggtc
gcctcggtcgtcgacgtgctgcagaccccggcgttcctgtgccggcagaccgacttcatc
cagaacgtggcgcgcgccggcaagccggtcaacatcaagaagggccagttcctgtcgccg
tgggagatgaagcacgtcaccgccaaggccaaggcgaccggcaacgaggcgatcatggcc
tgcgagcgcggcgccagcttcggctacaacaacctggtcagcgacatgcgctcgctgagc
gtgatgcgcgacaccggctgcccggtggtgttcgacgcgacccattcggtgcagctgccc
ggcggcatggacggcaagtccggcggccagcgcgagttcgtgccggtgctggcgcgcgcg
gcgatcgcggtcggcgtgtcgggcgtgttcatggaaacccacccgaaacccgaagaagcg
ctgtccgacggccccaacgcggtgccgctgccgaagatgcgcggcctgctggagaccttg
gtcgagctcgaccggatcaccaagaagaacgggttcctggagcaggatttctga
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