Lysobacter yananisis: RDV84_24985
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Entry
RDV84_24985 CDS
T09342
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
lya
Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_24985
Transporters [BR:
lya02000
]
Other transporters
Pores ion channels [TC:
1
]
RDV84_24985
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WMT03171
UniProt:
A0ABY9P841
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All DBs
Position
complement(6026548..6029256)
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AA seq
902 aa
AA seq
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MSHAVRNPEARYRRLPLALALALAAPLALAAPLALAAPLARAADAAAADDGAAADAADAA
GPGVTLDAVQVTGSNLKRSDEAGVNPVLVLDRVQIEKSGKVTVSDLLRSLTVNSGNSFNE
QYTGSFANGSAGVSLRGLSQKNTLVLVNGYRVASYGFAQGTQDNFVDLNALPLGAIERVE
ILKDGASALYGSDAIAGVVNLILRRKIEGVELDASYGAATEGGIDQHSIGLRAGRGDPAK
DGYSLRFSLDVFQRGQLNADERDLTKSGDYRSEPGGRLAGWSTQGGAFLSNPRAPVAFAC
QPGTQSRPYSDFGSPLPGNACAFNTQPFRTLIPDVERYQALVAGDVRLSDSVQGFAEILY
STSHNGAYFSAPMTVGAGLRAYDRGTGRLVDIPAVLPVGHPNNPNATPTPFEYSFLDLGA
RYKINKSQFSRALVGLRGNGEVWDWEVAASHSESRQREYVRNFLDRYAFEQVLADGSYDF
LNPSRTPGALDALRLSTRRPGTYRLSTLSGKISGFPFQWRAGDVGVAAGVEFRDEAQDAR
TSPQVLSGTELRPAINLIDGDRRVAAAFFEFSLKPWEQVEVQLAGRGDHYSDFGSAFSPK
LGVRWQLSDDFLLRLNASRGFRAPSLPEIAQSTTISYGSVIDPFDPVQPGASRGVTILRA
GNSNLKAERSSNVNLGLLWAPDADTSLGIDLYRIRQDDLIAPDNVQFVVSNPDANPGRIT
RDAQGRLQLVENRYSNQGTLTTTGFDVEGRKVWRAGDDSWTLDGTWTRLLSYEQPLVAGQ
AKQDGAGNNLFGALPKWRGITSLAWNRGDWNAQLSWRYIGGYGQKVVDARSNPGLRGKVD
DYHQFDLYVGFEGLRDTTLYASVQNLADKAPPFDPAGGALPYDITQYDALGRFVTVGVKY
KF
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgccgtccgcaatcccgaagcgcgttaccgacgcctgccgctggcgctcgcc
ctggccctggccgcgccgctggccctggccgcgccgctggccctggccgcgccgctggcg
cgggccgccgacgcggccgccgccgacgacggggccgccgccgatgcggccgatgccgcc
ggccccggcgtcaccctcgacgcggtccaggtcaccggcagcaacctcaagcgcagcgac
gaggccggggtcaatccggtgctggtgctcgaccgcgtgcagatcgagaagagcggcaag
gtcaccgtgtccgacctgctgcgcagcctcaccgtcaacagcggcaacagcttcaacgag
cagtacaccggcagcttcgccaacggttcggccggcgtctcgctgcgcgggctgagccag
aagaacaccctggtgctggtcaacggctaccgcgtggcctcgtacggtttcgcccagggc
acccaggacaacttcgtcgatctcaacgcgctgccgctgggcgcgatcgaacgggtcgaa
atcctcaaggacggcgcctcggcgctgtacggctccgacgccatcgccggcgtggtcaat
ctgatcctgcgccgcaagatcgaaggcgtcgaactcgacgcgtcctacggcgcggccacc
gaaggcggcatcgaccagcacagcatcggcctgcgcgccggccgcggcgacccggccaag
gacggctacagcctgcgtttcagcctggacgtgttccagcgcggccagctcaacgccgac
gagcgcgacctgaccaagagcggcgactaccgctccgaacccggcggccgcctggccggc
tggtccacccagggcggcgcgttcctgagcaacccgcgcgcgccggtcgcgttcgcctgc
cagccgggcacccagtcgcgcccctacagcgacttcggcagcccgctgccgggcaacgcc
tgcgccttcaacacccagccgttccgcaccctgatcccggacgtggagcgctatcaggcg
ctggtcgccggcgacgtgcgcctcagcgacagcgtgcagggcttcgccgagatcctctac
agcaccagccacaacggcgcctacttcagcgcgccgatgacggtcggcgccggcctgcgc
gcgtacgaccgcggcaccggccgcctggtcgacatcccggcggtgctgccggtcggccat
ccgaacaatcccaacgcgacgccgaccccgttcgagtattccttcctcgacctgggcgcg
cgctacaagatcaacaagtcgcagttctcgcgcgcgctggtcggcctgcgcggcaacggc
gaggtgtgggactgggaggtcgccgccagccattcggaaagtcgccagcgcgaatacgtg
cgcaacttcctcgaccgctatgcgttcgagcaggtgctggccgacggcagctacgacttc
ctcaacccctcgcgcacgcccggcgcgctcgacgcgctgcgcctgtccacgcgccgcccc
ggcacgtaccggctcagcacgctcagcggcaagatctccggcttcccgttccagtggcgc
gccggcgacgtcggcgtggccgcgggcgtggagttccgcgacgaagcgcaggacgcgcgc
accagcccgcaggtgctgtcgggcaccgagctgcgtccggcgatcaacctcatcgacggc
gaccgccgcgtcgccgccgcgttcttcgagttcagcctcaagccgtgggagcaagtggaa
gtgcagctcgccggccgcggcgaccactacagcgacttcggcagcgcgttctcgcccaag
ctcggcgtgcgctggcagctcagcgacgacttcctgctgcggctgaacgcctcgcgcggc
ttccgcgccccgtcgctgccggagatcgcgcagagcaccacgatcagctacggctcggtg
atcgatcccttcgatccggtccagcccggcgcctcgcgcggcgtgaccatcctgcgcgcc
ggcaattccaacctgaaggccgagcgctccagcaacgtcaacctcggcctgctgtgggcg
ccggacgccgacaccagcctgggcatcgacctgtaccgcatccgccaggacgacctgatc
gcgccggacaacgtgcagttcgtggtctccaacccggacgccaacccgggccgcatcacc
cgcgacgcgcagggccgcctgcaactggtggagaaccgctattccaaccagggcacgttg
accacgaccggcttcgacgtggaagggcgcaaggtctggcgcgccggcgacgacagctgg
accctggacggcacctggacccgcttgctgagctacgagcagccgctggtggcggggcag
gccaagcaggacggcgccggcaacaacctgttcggggcgctgccgaagtggcgcggcatc
acctcgctggcctggaaccgcggcgactggaacgcgcagctgtcgtggcgctacatcggc
ggctacggccagaaggtggtcgatgcgcgcagcaacccgggcctgcgcggcaaggtcgac
gattaccaccagttcgatctgtacgtcggctttgagggcctgcgcgacaccacgctgtac
gcctcggtgcagaacctcgccgacaaggcgccgccgttcgatccggccggcggcgcgctg
ccgtacgacatcacccagtacgacgcgctcggccgcttcgtcacggtgggggtgaagtac
aagttctga
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