Lysinibacillus sp. B2A1: C3943_03170
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Entry
C3943_03170 CDS
T05347
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lyb
Lysinibacillus sp. B2A1
Pathway
lyb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C3943_03170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyb03400
]
C3943_03170
Enzymes [BR:
lyb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C3943_03170
DNA repair and recombination proteins [BR:
lyb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C3943_03170
Prokaryotic type
C3943_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AVK82620
UniProt:
A0A2S0JGS2
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All DBs
Position
663716..664393
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AA seq
225 aa
AA seq
DB search
MKQVFPNDWQAILAEEMEKAYYKKLRQFVAHEYSTQTIYPPMNDVMNAFNTTPYQDVKVV
ILGQDPYHGPNQAHGLSFSVKPGIPHPPSLRNMLQELQDDVGCPIPQHGTLTKWAQQGVM
LLNTVLTVRAGQANSHKEQGWEQFTDAVIDKLAVRTEPIIFVLWGKPAQRKKPLIRKYST
PHVILEAPHPSPLSAYRGFFGSKPYSKINAQLLEWGEQPIDWCLA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagtattcccgaatgattggcaagcaatactagcagaagaaatggaaaaagca
tactataaaaagctacgacaatttgtagcacatgaatattcaacacaaaccatttatcca
cctatgaatgatgttatgaatgcctttaatacaacaccttatcaagatgtgaaggttgta
atattaggtcaagatccctatcatggtccgaatcaagcacatggattgagtttctcagta
aagccaggaattccacacccaccgagtctacgtaatatgcttcaagaattacaggatgat
gtgggttgtccgattcctcagcatggtacattaacgaaatgggcgcagcagggtgtcatg
ttattgaacacagttttaactgttagggcaggtcaagcaaactcccataaagaacaagga
tgggagcaatttacggatgctgtgatcgataaattagcagtaagaacagaacctattatt
tttgtgttgtggggcaagccggcacaacgaaaaaaaccattaattcgtaaatattccaca
ccccatgtcattttagaggctcctcatccaagtccacttagtgcctatagaggttttttt
ggtagtaaaccatattctaagattaatgcacagctactagaatggggagagcaacctatt
gattggtgtctagcatag
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