KEGG   Lysinibacillus sp. B2A1: C3943_05180
Entry
C3943_05180       CDS       T05347                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lyb  Lysinibacillus sp. B2A1
Pathway
lyb00010  Glycolysis / Gluconeogenesis
lyb00020  Citrate cycle (TCA cycle)
lyb00260  Glycine, serine and threonine metabolism
lyb00280  Valine, leucine and isoleucine degradation
lyb00310  Lysine degradation
lyb00380  Tryptophan metabolism
lyb00620  Pyruvate metabolism
lyb00630  Glyoxylate and dicarboxylate metabolism
lyb00640  Propanoate metabolism
lyb00670  One carbon pool by folate
lyb00785  Lipoic acid metabolism
lyb01100  Metabolic pathways
lyb01110  Biosynthesis of secondary metabolites
lyb01120  Microbial metabolism in diverse environments
lyb01200  Carbon metabolism
lyb01210  2-Oxocarboxylic acid metabolism
lyb01240  Biosynthesis of cofactors
Module
lyb_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lyb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lyb_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lyb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    C3943_05180 (lpdA)
   00020 Citrate cycle (TCA cycle)
    C3943_05180 (lpdA)
   00620 Pyruvate metabolism
    C3943_05180 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    C3943_05180 (lpdA)
   00640 Propanoate metabolism
    C3943_05180 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    C3943_05180 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    C3943_05180 (lpdA)
   00310 Lysine degradation
    C3943_05180 (lpdA)
   00380 Tryptophan metabolism
    C3943_05180 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    C3943_05180 (lpdA)
   00670 One carbon pool by folate
    C3943_05180 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lyb04147]
    C3943_05180 (lpdA)
Enzymes [BR:lyb01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     C3943_05180 (lpdA)
Exosome [BR:lyb04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   C3943_05180 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored HI0933_like FAD_binding_2 FAD_binding_3 NAD_binding_8 AlaDh_PNT_C UDPG_MGDP_dh_N Amino_oxidase NAD_binding_9 3HCDH_N DAO Thi4 ApbA
Other DBs
NCBI-ProteinID: AVK82989
UniProt: A0A2S0JHU0
LinkDB
Position
1127152..1128567
AA seq 471 aa
MVVGDFPIETDTLVIGSGPGGYVAAIRAAQTGQKVTIVEKNVLGGVCLNVGCIPSKALIS
VGHRFEQAKHSDDMGIIASDVKLDFSKAQAFKDSVVKKLTGGVEGLLKGNKVEIVQGEAY
FVDAHSVRIINGESAQTYTFNNVIIATGSRPVEIPTFKFSERVLNSTGALSLQEVPGKLV
VIGGGYIGTELGSAYANLGSQVTIIEGGKDILAGFEKQMTQIVKKGLKKKGVEIEVNASA
KGVEETENGVVVTYEVGGEEKKVEADYVLVTVGRRPNTDEMGLAEIGIEFGERGLINVDK
QCRTNIQNIYAIGDIVAGPQLAHKASYEGKVAAEAIAGEKSVVDYLAVPAVCFTDPEMAT
VGYNEDQAKTEGIEYTAAKFPFAANGRALALNQSEGFVKLVARKEDGLLIGAQIVGAGAS
DMIAEMGLAIEGGMTAEDIALTIHAHPTLGEITMEAAEVLLGNPIHIVTKK
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggtagtaggagatttcccgatcgaaacagatactcttgtcattggttcaggtcctgga
ggatatgtagcagcaattcgtgcagctcaaactggccaaaaagtaacaatcgttgaaaaa
aatgtacttggtggtgtgtgcttaaacgtaggctgtatcccatcaaaagcattaatttca
gtaggtcaccgttttgagcaagctaaacattcagatgacatgggaatcatcgcttctgat
gtgaaattagacttctcaaaagcacaagcatttaaagacagcgttgttaaaaaattaact
ggcggtgttgaaggcttacttaaaggtaataaagttgaaattgtacaaggtgaagcttat
ttcgttgacgcccattcagtgcgtatcatcaatggtgaatctgctcaaacttacacattt
aacaatgtcattattgcaacaggttctcgtccggttgaaattccaacattcaaattctct
gagcgcgtactaaattctactggtgcactttctttacaagaagttcctggtaaattagtt
gttatcggtggaggttatattggtacagagctaggatcagcttacgcaaaccttggctct
caagtaacaattattgaaggcggaaaagatattttagctggcttcgaaaaacaaatgacg
caaatcgtgaaaaaaggccttaaaaagaaaggcgttgaaattgaagttaacgcatctgca
aaaggcgttgaagaaactgaaaacggcgtagttgtaacatatgaagttggcggagaagag
aaaaaagttgaagctgattacgtattagttactgtaggtcgtcgtccaaatacagatgaa
atgggccttgctgaaatcggtattgaattcggtgaacgcggtcttattaatgttgacaaa
caatgtcgtacaaatattcaaaacatctatgcaattggtgatatcgttgcaggtcctcag
cttgcacataaagcatcttacgaaggtaaagttgctgctgaagcgattgctggtgaaaaa
tcagtagttgactatttagctgttcctgctgtatgcttcacagatccagaaatggcaaca
gttggttacaacgaagaccaagctaaaacggaaggcatcgaatacactgcagcgaaattc
ccattcgcagcaaatggtcgtgctcttgcattaaaccaatcagaaggtttcgtgaagctt
gttgctcgtaaagaagatggtttattaattggtgctcaaatcgtaggtgctggtgcatct
gatatgatcgctgaaatgggcttagcaatcgaaggcggtatgactgctgaagatatcgca
ttaacaattcatgctcacccaacattaggtgaaattactatggaagcagctgaagtccta
cttggcaacccaatccatattgttacaaaaaaataa

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