Lysinibacillus sp. B2A1: C3943_05180
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Entry
C3943_05180 CDS
T05347
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lyb
Lysinibacillus sp. B2A1
Pathway
lyb00010
Glycolysis / Gluconeogenesis
lyb00020
Citrate cycle (TCA cycle)
lyb00260
Glycine, serine and threonine metabolism
lyb00280
Valine, leucine and isoleucine degradation
lyb00310
Lysine degradation
lyb00380
Tryptophan metabolism
lyb00620
Pyruvate metabolism
lyb00630
Glyoxylate and dicarboxylate metabolism
lyb00640
Propanoate metabolism
lyb00670
One carbon pool by folate
lyb00785
Lipoic acid metabolism
lyb01100
Metabolic pathways
lyb01110
Biosynthesis of secondary metabolites
lyb01120
Microbial metabolism in diverse environments
lyb01200
Carbon metabolism
lyb01210
2-Oxocarboxylic acid metabolism
lyb01240
Biosynthesis of cofactors
Module
lyb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
lyb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lyb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
C3943_05180 (lpdA)
00020 Citrate cycle (TCA cycle)
C3943_05180 (lpdA)
00620 Pyruvate metabolism
C3943_05180 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
C3943_05180 (lpdA)
00640 Propanoate metabolism
C3943_05180 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C3943_05180 (lpdA)
00280 Valine, leucine and isoleucine degradation
C3943_05180 (lpdA)
00310 Lysine degradation
C3943_05180 (lpdA)
00380 Tryptophan metabolism
C3943_05180 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
C3943_05180 (lpdA)
00670 One carbon pool by folate
C3943_05180 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lyb04147
]
C3943_05180 (lpdA)
Enzymes [BR:
lyb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
C3943_05180 (lpdA)
Exosome [BR:
lyb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
C3943_05180 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_oxidored
HI0933_like
FAD_binding_2
FAD_binding_3
NAD_binding_8
AlaDh_PNT_C
UDPG_MGDP_dh_N
Amino_oxidase
NAD_binding_9
3HCDH_N
DAO
Thi4
ApbA
Motif
Other DBs
NCBI-ProteinID:
AVK82989
UniProt:
A0A2S0JHU0
LinkDB
All DBs
Position
1127152..1128567
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AA seq
471 aa
AA seq
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MVVGDFPIETDTLVIGSGPGGYVAAIRAAQTGQKVTIVEKNVLGGVCLNVGCIPSKALIS
VGHRFEQAKHSDDMGIIASDVKLDFSKAQAFKDSVVKKLTGGVEGLLKGNKVEIVQGEAY
FVDAHSVRIINGESAQTYTFNNVIIATGSRPVEIPTFKFSERVLNSTGALSLQEVPGKLV
VIGGGYIGTELGSAYANLGSQVTIIEGGKDILAGFEKQMTQIVKKGLKKKGVEIEVNASA
KGVEETENGVVVTYEVGGEEKKVEADYVLVTVGRRPNTDEMGLAEIGIEFGERGLINVDK
QCRTNIQNIYAIGDIVAGPQLAHKASYEGKVAAEAIAGEKSVVDYLAVPAVCFTDPEMAT
VGYNEDQAKTEGIEYTAAKFPFAANGRALALNQSEGFVKLVARKEDGLLIGAQIVGAGAS
DMIAEMGLAIEGGMTAEDIALTIHAHPTLGEITMEAAEVLLGNPIHIVTKK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagatttcccgatcgaaacagatactcttgtcattggttcaggtcctgga
ggatatgtagcagcaattcgtgcagctcaaactggccaaaaagtaacaatcgttgaaaaa
aatgtacttggtggtgtgtgcttaaacgtaggctgtatcccatcaaaagcattaatttca
gtaggtcaccgttttgagcaagctaaacattcagatgacatgggaatcatcgcttctgat
gtgaaattagacttctcaaaagcacaagcatttaaagacagcgttgttaaaaaattaact
ggcggtgttgaaggcttacttaaaggtaataaagttgaaattgtacaaggtgaagcttat
ttcgttgacgcccattcagtgcgtatcatcaatggtgaatctgctcaaacttacacattt
aacaatgtcattattgcaacaggttctcgtccggttgaaattccaacattcaaattctct
gagcgcgtactaaattctactggtgcactttctttacaagaagttcctggtaaattagtt
gttatcggtggaggttatattggtacagagctaggatcagcttacgcaaaccttggctct
caagtaacaattattgaaggcggaaaagatattttagctggcttcgaaaaacaaatgacg
caaatcgtgaaaaaaggccttaaaaagaaaggcgttgaaattgaagttaacgcatctgca
aaaggcgttgaagaaactgaaaacggcgtagttgtaacatatgaagttggcggagaagag
aaaaaagttgaagctgattacgtattagttactgtaggtcgtcgtccaaatacagatgaa
atgggccttgctgaaatcggtattgaattcggtgaacgcggtcttattaatgttgacaaa
caatgtcgtacaaatattcaaaacatctatgcaattggtgatatcgttgcaggtcctcag
cttgcacataaagcatcttacgaaggtaaagttgctgctgaagcgattgctggtgaaaaa
tcagtagttgactatttagctgttcctgctgtatgcttcacagatccagaaatggcaaca
gttggttacaacgaagaccaagctaaaacggaaggcatcgaatacactgcagcgaaattc
ccattcgcagcaaatggtcgtgctcttgcattaaaccaatcagaaggtttcgtgaagctt
gttgctcgtaaagaagatggtttattaattggtgctcaaatcgtaggtgctggtgcatct
gatatgatcgctgaaatgggcttagcaatcgaaggcggtatgactgctgaagatatcgca
ttaacaattcatgctcacccaacattaggtgaaattactatggaagcagctgaagtccta
cttggcaacccaatccatattgttacaaaaaaataa
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