Lysinibacillus sp. B2A1: C3943_10660
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Entry
C3943_10660 CDS
T05347
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lyb
Lysinibacillus sp. B2A1
Pathway
lyb00020
Citrate cycle (TCA cycle)
lyb00190
Oxidative phosphorylation
lyb00650
Butanoate metabolism
lyb00720
Other carbon fixation pathways
lyb01100
Metabolic pathways
lyb01110
Biosynthesis of secondary metabolites
lyb01120
Microbial metabolism in diverse environments
lyb01200
Carbon metabolism
Module
lyb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lyb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C3943_10660
00650 Butanoate metabolism
C3943_10660
09102 Energy metabolism
00190 Oxidative phosphorylation
C3943_10660
00720 Other carbon fixation pathways
C3943_10660
Enzymes [BR:
lyb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
C3943_10660
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
FAD_oxidored
AlaDh_PNT_C
Phage_int_SAM_1
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AVK84002
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Position
2295993..2297747
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AA seq
584 aa
AA seq
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MAKSKIIVVGGGLAGLMATIKAAEVGTEVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWIHFDDTVYGGDFLANQPPVKGMCDAAPGIIHLMDRMGVMFNRTPEGLLDFRRFGGTL
MHRTAFSGATTGQQLLYALDEQVRSHEVAGLVNKYEHWEFLGVIIDEDGVCRGIVAQDMR
TEEIKSFRADAVIMATGGPGIIFGKTTNSVINTGSAASIVYQQGASYANGEFIQIHPTAI
PGDDKNRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK
LGINGENMVYLDLSHKDPHELDVKLGGIIEIYEKFVGDDPRKLPMKIFPAVHYSMGGLWV
DYNQMTEIPGLFAAGECDYSQHGANRLGANSLLSAIYGGMVAGPNAVDYVKHLKKHAEDL
PQQIYDARVKEEQDKWDAIMKLDGTENAYLLHKELGEMMTATMTVVRYNDQLEDTLKKLD
ELTERWNNININDTQKWSNQGAHFTRQLKNMLILAKVMTQGALLRNESRGAHYKPDFPNR
DDENFLKTTIAKFDPTTGNPIITYQEVDVSLIPPRKRDYSAKGD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagcaaaataattgttgtcggcggcggtcttgctggtctgatggcaacgatt
aaagcagctgaagttggtactgaagttgatttattctcattagttcctgtaaaacgctca
cactctgtatgtgcgcaaggcggaattaatggtgcggtaaatacaaaaggtgaaggggat
tctccttggattcactttgatgatacagtgtatggtggggacttcttagctaaccaacca
ccagttaagggtatgtgtgatgcggctcctggtattattcacttaatggaccgtatgggt
gttatgttcaaccgtacacctgaaggacttcttgatttccgtcgttttggcggtacttta
atgcaccgtactgcattctcaggtgcaacaactggtcaacaattactatatgcactagat
gagcaagttcgttctcacgaagtggctggtttagttaataaatatgagcactgggaattc
cttggtgtaattattgacgaagatggcgtttgccgtggtatcgttgcgcaagatatgcgt
acagaagaaattaaatcattccgtgcagacgctgttattatggcgactggaggtcctggt
attatcttcggtaaaacaacaaactctgtcattaacacaggttctgctgcttctatcgtt
taccaacaaggtgcttcttatgcgaatggtgaattcatccaaattcaccctacagcgatt
cctggagatgacaaaaaccgtttaatgtcagaatcggctcgtggtgaaggtggacgtatt
tggacttataaagacggtaagccttggtacttcttagaagagaaatacccagcttatggt
aacttagtaccacgtgatattgcaacacgtgaaattttcgacgtttgtgtaaaccaaaaa
cttggtatcaatggcgaaaacatggtatacctagatctttctcataaagatccacatgaa
ttagacgttaaacttggtggtatcatcgagatttacgaaaaattcgtaggggatgaccca
cgtaaattacctatgaaaattttcccagcagttcactattcaatgggtggattatgggtt
gactacaaccaaatgactgaaatacctggtctatttgcagcaggtgaatgtgattattct
caacatggtgcaaaccgtcttggtgcgaactcattattatctgctatttatggcggtatg
gttgctggtcctaacgcagtagactacgtaaaacatcttaaaaagcatgcagaagactta
ccacaacaaatctacgatgctcgcgttaaagaagaacaagataagtgggatgctatcatg
aaattggacggcacggaaaacgcttacttgcttcataaagagcttggtgagatgatgact
gctacgatgacagtagtacgttataacgaccaacttgaagatacattaaaaaaattagat
gagcttactgagcgttggaataacatcaacatcaatgatacacaaaaatggagcaaccaa
ggtgcacactttacacgtcagcttaaaaacatgttaattctagcgaaagtaatgacacaa
ggtgcattattgcgtaatgaatctcgcggtgctcactataaaccagatttcccgaaccgt
gatgatgaaaacttcttaaaaacaacaattgcgaagtttgatccaactactggtaatcca
atcatcacgtaccaagaagtcgacgtttctttaattccaccacgtaaacgcgactactct
gcgaaaggagactaa
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