Lysinibacillus sp. B2A1: C3943_12455
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Entry
C3943_12455 CDS
T05347
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lyb
Lysinibacillus sp. B2A1
Pathway
lyb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C3943_12455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyb03400
]
C3943_12455
DNA repair and recombination proteins [BR:
lyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C3943_12455
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C3943_12455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AVK84323
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All DBs
Position
2645720..2646514
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AA seq
264 aa
AA seq
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MLHKWEGIVLKVRAYGESNKIVTLLTREAGKVATMARGAKKPSSRLASVTQPFTYGMFMV
QHHTGMGTLQQGEHLNSMRHIREDIMATAYASYIMELVERVVEEGKAEPFAFDVLLHALQ
AIEEGYDPEAITLFVEWKMLPYTGVQPILHACATCGAVDGEFAFSFAQGGFLCHRCYQHD
PYIIRLTPTQLKLIRMFYTVPIDQIGKLELKKETKYFIKKIITTIYEEQTGIRFKTKKFI
EQLERTPELQLRTNVETEKMPEDP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgctacataaatgggaaggcattgttttaaaggtacgggcctacggagaatccaataaa
attgtgactttactaacaagagaagcaggtaaagtggcaacaatggcaagaggtgctaaa
aagccttcgagtagactagcatctgtgacacagccgtttacatacggtatgtttatggtc
cagcatcatacaggtatgggaacattgcaacaaggcgagcatctcaattcgatgcgacat
atacgtgaagacatcatggcaacagcatatgcaagttatatcatggaacttgttgaacga
gtagtggaagagggaaaagctgaaccatttgcatttgatgtccttttacatgcattgcaa
gcaattgaggaaggctatgatcctgaagctattacattgttcgttgaatggaaaatgttg
ccctatacaggggttcagcctattttacatgcctgcgctacttgtggggcagtggatggg
gaatttgcattttcctttgcacagggaggctttttatgtcatcgatgttatcagcatgat
ccttacattattcgactaactccgacgcaactgaagctgattcgaatgttttacactgta
ccaattgatcagattggtaagttggaattaaaaaaggaaacaaagtattttatcaaaaaa
attattacgaccatttatgaggaacaaacaggtattcgttttaagactaaaaaatttatc
gagcaacttgagagaacgccagaattacaattgagaacaaatgttgaaacagaaaaaatg
ccagaagacccttaa
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