KEGG   Lysinibacillus sp. B2A1: C3943_13755
Entry
C3943_13755       CDS       T05347                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lyb  Lysinibacillus sp. B2A1
Pathway
lyb00010  Glycolysis / Gluconeogenesis
lyb00020  Citrate cycle (TCA cycle)
lyb00260  Glycine, serine and threonine metabolism
lyb00280  Valine, leucine and isoleucine degradation
lyb00310  Lysine degradation
lyb00380  Tryptophan metabolism
lyb00620  Pyruvate metabolism
lyb00630  Glyoxylate and dicarboxylate metabolism
lyb00640  Propanoate metabolism
lyb00670  One carbon pool by folate
lyb00785  Lipoic acid metabolism
lyb01100  Metabolic pathways
lyb01110  Biosynthesis of secondary metabolites
lyb01120  Microbial metabolism in diverse environments
lyb01200  Carbon metabolism
lyb01210  2-Oxocarboxylic acid metabolism
lyb01240  Biosynthesis of cofactors
Module
lyb_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lyb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lyb_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lyb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    C3943_13755 (lpdA)
   00020 Citrate cycle (TCA cycle)
    C3943_13755 (lpdA)
   00620 Pyruvate metabolism
    C3943_13755 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    C3943_13755 (lpdA)
   00640 Propanoate metabolism
    C3943_13755 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    C3943_13755 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    C3943_13755 (lpdA)
   00310 Lysine degradation
    C3943_13755 (lpdA)
   00380 Tryptophan metabolism
    C3943_13755 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    C3943_13755 (lpdA)
   00670 One carbon pool by folate
    C3943_13755 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lyb04147]
    C3943_13755 (lpdA)
Enzymes [BR:lyb01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     C3943_13755 (lpdA)
Exosome [BR:lyb04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   C3943_13755 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA FAD_oxidored Pyr_redox_3 DAO FAD_binding_2 HI0933_like FAD_binding_3 AlaDh_PNT_C NAD_binding_8 3HCDH_N Thi4 2-Hacid_dh_C NAD_binding_7 Trp_halogenase
Other DBs
NCBI-ProteinID: AVK84561
LinkDB
Position
2904036..2905463
AA seq 475 aa
MAQNYDVVILGGGTGGYVAAIRAAQLGLKTAIVERERLGGTCLHKGCIPSKALLRSAEVY
RMANKTAAEFGVDIEGVTLQFDKVQARKQAIVEQLSQGVNTLMKKGKIDVYQGTGRILGP
SIFSPMPGTISVEMSNGEENEMLVPTNVVIATGSKPREMAGLSIDGKFVMNSDHALQMEE
LPKSLLIVGGGVIGIEWASMLCDFGVYVTVIEYGPSILPAEDADIVKELTKQLEKRGVRI
VTNARLDIGTFKIENDNVFISAKVNEKDELFEADKLLLCVGREANTRDIGLENTEIEIEN
GYIKVNDSYQTKESHMYAIGDVIGGLQLAHVASHEGLCAIEHIATGKTEALDVLKVPKCV
YSFPEVASIGLTESAAKEQGFTLKVGKFPFKAIGKALVNGETDGFVKIVADEETNDILGI
HMVGPHVTDLIGEASLAKLLDATPWEVSQAIHPHPSLNEVLVESALAVDNRAIHF
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggctcaaaattatgatgttgtcattttaggcggaggtacaggaggctatgttgcagca
attcgtgcggcacagttaggtttaaaaacagccattgttgaacgtgaacgacttggtggc
acatgcttgcataaaggctgtataccgagtaaggccttacttcgaagtgcggaagtgtat
cgtatggccaataaaacggctgctgaatttggtgtagatattgaaggagttacattgcag
tttgataaagtgcaggctagaaaacaagcgattgttgagcaattgagccaaggtgtgaat
acactgatgaaaaaaggtaaaatagatgtttatcagggaacaggaagaattttaggtcct
tccatcttttcaccaatgccaggtactatttcagttgaaatgagtaatggtgaggaaaat
gaaatgcttgtgccaacaaatgttgtgattgcaacaggttcgaagccaagagaaatggct
ggactatcaattgatgggaaatttgtaatgaactctgatcatgcattacaaatggaagaa
ctaccgaagtcattgctaatcgttggtggcggcgttatcggtatcgaatgggcatcaatg
ctttgcgattttggggtatacgtaacagtcattgaatatggaccatcgattttaccagca
gaagatgcagatattgtcaaagaattgacgaagcaacttgaaaaaagaggcgttcgtatt
gtgacaaatgctcgtttagatataggaacattcaaaattgaaaatgataacgttttcatt
tctgccaaagttaacgaaaaggatgaattattcgaggctgataaactattactttgtgta
gggcgtgaagcgaatacacgagatataggtttagaaaatacagaaattgaaattgagaat
gggtatattaaagtcaatgattcgtatcagacaaaggaatcacatatgtatgccatagga
gatgtgattggtggtctgcaattagcacatgtagcttcacacgaaggattatgtgccatt
gaacatattgccacaggtaaaacagaggcactagacgtactcaaggtgccgaaatgtgtt
tactccttcccagaggttgcaagcattggcttaaccgaaagtgctgctaaggaacagggc
tttaccttaaaagtaggaaagtttccattcaaggcgattggtaaagcgcttgtaaatgga
gagacagacggctttgtaaaaattgttgcagatgaagaaacgaatgatattctgggtatt
catatggtagggccgcatgtaacggatttaattggtgaagcatcacttgctaaattactt
gatgcaacgccatgggaggttagtcaggctattcacccacatccgtctctgaatgaggtg
ctagtagaatcagcattagctgttgataatcgtgccattcacttttaa

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