Lysinibacillus sp. B2A1: C3943_13755
Help
Entry
C3943_13755 CDS
T05347
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lyb
Lysinibacillus sp. B2A1
Pathway
lyb00010
Glycolysis / Gluconeogenesis
lyb00020
Citrate cycle (TCA cycle)
lyb00260
Glycine, serine and threonine metabolism
lyb00280
Valine, leucine and isoleucine degradation
lyb00310
Lysine degradation
lyb00380
Tryptophan metabolism
lyb00620
Pyruvate metabolism
lyb00630
Glyoxylate and dicarboxylate metabolism
lyb00640
Propanoate metabolism
lyb00670
One carbon pool by folate
lyb00785
Lipoic acid metabolism
lyb01100
Metabolic pathways
lyb01110
Biosynthesis of secondary metabolites
lyb01120
Microbial metabolism in diverse environments
lyb01200
Carbon metabolism
lyb01210
2-Oxocarboxylic acid metabolism
lyb01240
Biosynthesis of cofactors
Module
lyb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
lyb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lyb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
C3943_13755 (lpdA)
00020 Citrate cycle (TCA cycle)
C3943_13755 (lpdA)
00620 Pyruvate metabolism
C3943_13755 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
C3943_13755 (lpdA)
00640 Propanoate metabolism
C3943_13755 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C3943_13755 (lpdA)
00280 Valine, leucine and isoleucine degradation
C3943_13755 (lpdA)
00310 Lysine degradation
C3943_13755 (lpdA)
00380 Tryptophan metabolism
C3943_13755 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
C3943_13755 (lpdA)
00670 One carbon pool by folate
C3943_13755 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lyb04147
]
C3943_13755 (lpdA)
Enzymes [BR:
lyb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
C3943_13755 (lpdA)
Exosome [BR:
lyb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
C3943_13755 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
FAD_oxidored
Pyr_redox_3
DAO
FAD_binding_2
HI0933_like
FAD_binding_3
AlaDh_PNT_C
NAD_binding_8
3HCDH_N
Thi4
2-Hacid_dh_C
NAD_binding_7
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
AVK84561
LinkDB
All DBs
Position
2904036..2905463
Genome browser
AA seq
475 aa
AA seq
DB search
MAQNYDVVILGGGTGGYVAAIRAAQLGLKTAIVERERLGGTCLHKGCIPSKALLRSAEVY
RMANKTAAEFGVDIEGVTLQFDKVQARKQAIVEQLSQGVNTLMKKGKIDVYQGTGRILGP
SIFSPMPGTISVEMSNGEENEMLVPTNVVIATGSKPREMAGLSIDGKFVMNSDHALQMEE
LPKSLLIVGGGVIGIEWASMLCDFGVYVTVIEYGPSILPAEDADIVKELTKQLEKRGVRI
VTNARLDIGTFKIENDNVFISAKVNEKDELFEADKLLLCVGREANTRDIGLENTEIEIEN
GYIKVNDSYQTKESHMYAIGDVIGGLQLAHVASHEGLCAIEHIATGKTEALDVLKVPKCV
YSFPEVASIGLTESAAKEQGFTLKVGKFPFKAIGKALVNGETDGFVKIVADEETNDILGI
HMVGPHVTDLIGEASLAKLLDATPWEVSQAIHPHPSLNEVLVESALAVDNRAIHF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaattatgatgttgtcattttaggcggaggtacaggaggctatgttgcagca
attcgtgcggcacagttaggtttaaaaacagccattgttgaacgtgaacgacttggtggc
acatgcttgcataaaggctgtataccgagtaaggccttacttcgaagtgcggaagtgtat
cgtatggccaataaaacggctgctgaatttggtgtagatattgaaggagttacattgcag
tttgataaagtgcaggctagaaaacaagcgattgttgagcaattgagccaaggtgtgaat
acactgatgaaaaaaggtaaaatagatgtttatcagggaacaggaagaattttaggtcct
tccatcttttcaccaatgccaggtactatttcagttgaaatgagtaatggtgaggaaaat
gaaatgcttgtgccaacaaatgttgtgattgcaacaggttcgaagccaagagaaatggct
ggactatcaattgatgggaaatttgtaatgaactctgatcatgcattacaaatggaagaa
ctaccgaagtcattgctaatcgttggtggcggcgttatcggtatcgaatgggcatcaatg
ctttgcgattttggggtatacgtaacagtcattgaatatggaccatcgattttaccagca
gaagatgcagatattgtcaaagaattgacgaagcaacttgaaaaaagaggcgttcgtatt
gtgacaaatgctcgtttagatataggaacattcaaaattgaaaatgataacgttttcatt
tctgccaaagttaacgaaaaggatgaattattcgaggctgataaactattactttgtgta
gggcgtgaagcgaatacacgagatataggtttagaaaatacagaaattgaaattgagaat
gggtatattaaagtcaatgattcgtatcagacaaaggaatcacatatgtatgccatagga
gatgtgattggtggtctgcaattagcacatgtagcttcacacgaaggattatgtgccatt
gaacatattgccacaggtaaaacagaggcactagacgtactcaaggtgccgaaatgtgtt
tactccttcccagaggttgcaagcattggcttaaccgaaagtgctgctaaggaacagggc
tttaccttaaaagtaggaaagtttccattcaaggcgattggtaaagcgcttgtaaatgga
gagacagacggctttgtaaaaattgttgcagatgaagaaacgaatgatattctgggtatt
catatggtagggccgcatgtaacggatttaattggtgaagcatcacttgctaaattactt
gatgcaacgccatgggaggttagtcaggctattcacccacatccgtctctgaatgaggtg
ctagtagaatcagcattagctgttgataatcgtgccattcacttttaa
DBGET
integrated database retrieval system