Lysinibacillus sp. B2A1: C3943_22645
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Entry
C3943_22645 CDS
T05347
Name
(GenBank) phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
lyb
Lysinibacillus sp. B2A1
Pathway
lyb00260
Glycine, serine and threonine metabolism
lyb00270
Cysteine and methionine metabolism
lyb00680
Methane metabolism
lyb01100
Metabolic pathways
lyb01110
Biosynthesis of secondary metabolites
lyb01120
Microbial metabolism in diverse environments
lyb01200
Carbon metabolism
lyb01230
Biosynthesis of amino acids
Module
lyb_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
lyb00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
C3943_22645
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C3943_22645
00270 Cysteine and methionine metabolism
C3943_22645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lyb04147
]
C3943_22645
Enzymes [BR:
lyb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
C3943_22645
1.1.1.399 2-oxoglutarate reductase
C3943_22645
Exosome [BR:
lyb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
C3943_22645
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Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
ACT
ACT_AHAS_ss
KARI_N
NAD_binding_2
UDPG_MGDP_dh_C
Lys_Orn_oxgnase
ACT_4
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AVK86097
UniProt:
A0A2S0JRQ1
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Position
4620874..4622481
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AA seq
535 aa
AA seq
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MTTATKTINVFIADPLSEDGIFPLRQEQDLDLNIIVDTGLAQEELIAKIGDVDVLLVRSQ
TTVTREVIEAAKNLKLIGRAGVGVDNIDLTAATEHGIIVVNAPDGNTNSAAEHTIAMMTS
LARHIPQAFNTLKNGKWDRKSYVGVELKNKTLGVVGFGRIGVEVAYRAKGQRMNVMAYDP
FLTDERAKELGVTKSTVEEICENADFITVHTPLLPETRNLINKEKFAMMKDGVRIINCAR
GGIINEDDLYDAIEEGKVAGAALDVFVSEPATDHKLLTLPQVIATPHLGASTIEAQESVA
VDVSNDIIKFYKTGTVTNPVNMPSIPKELLAQVEPFFELAEKLGSFLSQVTAEPVKEINL
SYAGEVANYDVRPLTSNALKGLLSKNHGNHVNDVNARYLSERIGMKINEHKTTTAKGFTS
LITIEIKTANETHTVAGTLLNGLGARIVKVEDYVVDVIPQGHLLYIKNTDKPGAIGRVAT
KLAEKDINIATMQVGRAQVGGTAVMMLTIDNVVTEEDLKFVAQLENIDEVKAISL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgactactgcaacaaaaacaattaacgtatttatcgctgatccactaagtgaagatggt
attttcccacttcgtcaagaacaagatttagatcttaatatcattgttgatactggttta
gcacaagaagaattaatcgcaaaaattggggatgtagatgttctattagtgcgttctcaa
acaactgtaacacgcgaagtaattgaagcggctaaaaacttaaagctaattggacgtgct
ggtgtaggtgtggacaatatcgatcttactgcggcaacagagcatggtattatcgtagta
aatgcaccagatggtaacacaaattctgcagcagagcacactattgccatgatgacttcc
cttgcacgtcatataccacaagcatttaacacattaaaaaatgggaaatgggatcgtaaa
tcatatgttggggttgagcttaaaaataaaacattaggtgttgtaggcttcggtcgtatc
ggtgttgaagtagcatatcgtgctaaaggtcaacgtatgaacgtaatggcatatgatcca
ttcctaacagatgaacgtgcaaaagaattaggcgttacaaaatcaactgttgaagaaatt
tgtgaaaatgcagatttcattacagtacacacaccacttcttccagaaacacgtaatctt
attaacaaagagaaatttgctatgatgaaagatggcgtacgcattattaactgtgcacgt
ggcggtattattaatgaggacgatttatacgatgctatcgaagaaggtaaggtagcaggt
gctgctcttgacgtattcgtatctgagccagcaacggatcataagctacttactttacca
caagtaatcgcaacacctcacttaggtgcatctacaattgaagctcaagaatctgtagct
gtggatgtttcaaatgatattattaaattctataaaactggtactgtaactaacccagtg
aatatgccttctattccgaaagagctacttgcacaagttgaaccgttcttcgagttagcg
gaaaaactaggttcattcttatctcaagtgacagctgagcctgtaaaggaaatcaattta
tcatatgctggcgaggtagcaaactatgatgtgcgaccattaacatcaaatgcattaaaa
ggcttattatctaaaaatcacggtaaccatgtgaatgacgtaaatgctcgctacttatct
gagcgtatcggcatgaaaattaatgagcataagactacaacagctaaaggcttcactagc
ttaattacgattgaaattaaaacagcgaatgaaacacatactgtagctggtacattatta
aacggtctaggtgcacgtattgtcaaagtagaagactatgttgttgacgtgattccacaa
ggtcacctactttacattaaaaacacggacaaaccaggtgcaatcggtcgcgtagccaca
aagctagctgaaaaagatattaacatcgcaacaatgcaggttggccgggcacaggttgga
ggaacagctgtcatgatgcttacaatcgataatgtggtaacagaagaagatttgaaattc
gttgcacaattagaaaatattgatgaagtaaaagcgattagcctataa
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