Lysinibacillus sp. B2A1: C3943_23665
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Entry
C3943_23665 CDS
T05347
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyb
Lysinibacillus sp. B2A1
Pathway
lyb03420
Nucleotide excision repair
lyb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3943_23665
03430 Mismatch repair
C3943_23665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyb03400
]
C3943_23665
Enzymes [BR:
lyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3943_23665
DNA repair and recombination proteins [BR:
lyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3943_23665
MMR (mismatch excision repair)
Other MMR factors
C3943_23665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
PcrA_UvrD_tudor
UvrD-helicase
UvrD_C_2
AAA_12
AAA_19
Viral_helicase1
Urocanase_N
Motif
Other DBs
NCBI-ProteinID:
AVK87097
UniProt:
A0A2S0JUI7
LinkDB
All DBs
Position
complement(4826771..4828408)
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AA seq
545 aa
AA seq
DB search
MRGNSHVRCEWGEKLETTSKAYLSISNKSQYLLVQLLAKKFKNICVVGDSDQSIYRWRGA
DIGNILSFEKDYPNAKVIMLEQNYRSTKRILQAANDVIQNNTTRYPKELRTENAEGEKIV
LYKAYNEQEEAQFVIQTIQQLMKKDNRSFDDFAILYRTNAQSRVMEEALVKSNIAYQIVG
GTKFYDRKEIKDLLAYLRLIANNDDDLSLARIINEPKRSIGATSFEKMARYAIEQDRSIF
DAMNDLVFMGLTGKAANSAEQFYAMIKGFTEMQEYLSVTEMVEQVIEKSGYRAMLQNEKT
IEAESRLENIEEFLSVTKAFEERSDDKSLIAFLTDLALIADIDALDKEDTSKGNIILMTM
HAAKGLEFPVVFIIGMEENIFPHSRSLDDMDEMEEERRLAYVGITRAEERLYLTCAQSRT
IFGRSSYNNASRFLREISEEITESISKGGAKPEVPFAASSRSAGNYQRRILGDIQKTQPA
TSRLQATGGDQFGWKAGDKAVHKKWGTGMVVSVKGEGDGTELDIAFPQPIGIKRLLAQFA
PIEKA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaaactctcacgtacggtgtgaatggggggaaaagctagagaccacttcaaag
gcttacctatccatatccaataaatcccaatatttacttgtgcagttattggctaaaaaa
tttaaaaacatttgcgttgtaggggattcagaccaatcaatttatcgttggcgcggagca
gacattggcaatatcctgtcctttgaaaaggactatccaaatgcaaaggttattatgctt
gaacaaaattatcgttcaacaaaacgcatcctccaagcagcaaatgacgtcattcagaat
aatacaacacgttacccgaaagaactgcgtacagaaaatgcagaaggtgaaaaaatcgtc
ttgtacaaagcgtataacgagcaagaggaagcacaattcgttatacaaacaatccaacag
cttatgaaaaaagataatcgctcattcgatgattttgcgattttatatcgtacaaatgca
cagtcacgtgtaatggaggaagcgcttgttaaatccaatatagcttatcaaattgttggc
ggtacaaagttctatgatcgtaaagagattaaggatttactggcttatttacgtctgatt
gccaataatgatgatgatttatcgcttgcacgtattattaatgaaccaaagcgtagtatt
ggtgccacctcctttgaaaaaatggcgcgctatgcaattgaacaagatcgttcaattttt
gatgccatgaatgaccttgtatttatggggctaacaggcaaggctgcaaattcagcagag
caattctatgcaatgattaaaggctttacagagatgcaggaatatttatcggttactgaa
atggtagagcaggtgatcgaaaaatccggttatcgagcaatgctacaaaatgaaaaaacg
attgaagcagaaagccgtctagaaaatattgaagaatttttatcagtaacaaaagcattc
gaggagcgtagtgatgataagagcttaatagccttcttaacagatttagcacttattgca
gatattgatgcattggacaaagaggatacatccaaaggcaacattattttaatgacgatg
catgccgcaaagggtttagaattccctgttgtctttatcattggaatggaagaaaatatc
ttcccgcactctcgttcacttgatgatatggatgaaatggaagaagaacggcgtttagcg
tatgttggcatcactcgtgcagaggagcgtttgtatttgacatgtgcacaaagccgaacg
atttttggtcgttctagttataacaatgcctctcgttttttacgtgaaatttcagaggag
attacagagtctatttccaaaggtggtgcgaaacctgaagttccatttgctgctagtagc
cgttcagcaggcaattatcaaaggcgaatacttggagacattcagaaaacgcaacctgca
acctctcgattacaagcaactggtggggaccaatttggctggaaggctggagataaagca
gttcataaaaaatggggaacaggtatggttgtcagtgtaaaaggtgagggtgatggtaca
gagctagatatcgcttttccacagccaatcggcattaagcgattactagcacaatttgca
cctattgaaaaagcgtaa
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