Lysinibacillus sp. B2A1: C3943_26295
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Entry
C3943_26295 CDS
T05347
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lyb
Lysinibacillus sp. B2A1
Brite
KEGG Orthology (KO) [BR:
lyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyb03400
]
C3943_26295
DNA repair and recombination proteins [BR:
lyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C3943_26295
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
Lon_C
ChlI
DnaB_C
DUF7125
AAA_22
nSTAND_NTPase5
ABC_tran
RecA_N
AAA_16
Rad51
nSTAND3
NTPase_1
ATPase_2
AAA_5
KdpD
MCM
AAA_30
SLFN-g3_helicase
GvpD_P-loop
AAA_24
AAA_14
MeaB
KTI12
DAP3
AAA_29
CbiA
NPHP3_N
AAA
NACHT
ArsA_ATPase
Fer4_NifH
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AVK86726
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Position
complement(5343838..5345214)
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AA seq
458 aa
AA seq
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MAKKKTKFVCTGCGYESAKWMGRCPGCGEWNKMVEEVEVVAKGPRGAFQHSATVTQKALP
IMQVEAAEESRITTEMGELNRVLGGGIVPGSLVLIGGDPGIGKSTLLLQVSALLSNKGHR
VLYISGEESIRQTKLRAERLGVVSQELYIYSETNLEFLNQTIEDVQPKFVIVDSIQTVFH
PEVTSAPGSVSQVRECTAELMRIAKTKGIAIFLVGHVTKEGQIAGPRILEHMVDTVLYFE
GERHHNHRILRSQKNRFGSTNEIAIFEMLQGGLKEVLNPSELFLQERSQGAAGSTIVASM
EGTRPILVEIQSLVTPTSFNYPKRMATGVDQNRVQLLMAVLEKRMGLMLQAQDAYIKVAG
GVKLDEPAIDLAVLTSIVSSFKDQAVRATDCFVGEVGLTGEVRRVSRIEQRVIEAAKLGF
KRVFIPASNIGGWDFPQGIEIVGVETIKDALNACFREL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagaaaaaaacgaaatttgtatgcacaggctgcggctatgaatctgcaaaatgg
atgggaagatgtccaggctgtggggaatggaataagatggtcgaagaagtagaggtcgta
gcgaaaggacctcgcggagccttccagcattctgcgacagttacgcaaaaagctcttcct
attatgcaggttgaggctgcagaggagtctcgaattacaacagaaatgggtgagcttaac
cgagtgctaggcggaggaatcgttccaggctctcttgtgctaataggaggtgaccctggt
atagggaagtcgacgttattactacaagtgtccgctttactttcaaataaggggcatcgt
gtgctttatatttctggtgaggaatcaatccgtcaaacaaagctgcgtgcggagcgttta
ggagtagtatcacaggagctatatatctattctgaaacgaatttagagtttttaaatcaa
actattgaggatgtgcaaccaaagtttgttattgtcgactccattcaaacagtgtttcat
cctgaggtaactagtgcccctggcagtgtatcgcaggtgcgtgaatgtacggcagagttg
atgagaattgctaaaacgaagggcattgctatatttctagttggtcatgtaacgaaggag
ggccaaatcgcaggaccacgtattttggagcatatggtggatactgtgctgtattttgaa
ggggagcgccatcataatcaccgtattttgcgcagtcaaaagaaccgctttggctcaaca
aacgagattgctatatttgaaatgcttcaggggggcttaaaggaagtattaaatccatct
gagctttttttacaggaacgttcacagggggcagcagggtcaaccattgtggcttctatg
gagggtacacggccaattcttgttgaaattcaatcactcgtaacacctacaagcttcaac
tatccaaagcgtatggcaacaggtgttgatcaaaaccgggtgcagctgttaatggctgtt
ttagaaaagagaatgggtctcatgctacaggcacaggatgcatatattaaagttgctggc
ggtgtaaagctagatgaacctgccattgatttagcagtgctgacaagcattgtctcaagc
tttaaggatcaagctgttagagctacagattgttttgttggagaagtgggattaacgggg
gaggtacgccgtgtttctcgtattgaacaacgtgtaattgaggcggcaaagctaggattt
aaacgagtgtttattccagcttcaaatattggcggctgggattttccgcaaggtattgag
attgtcggggtagaaacaataaaggatgcactgaatgcttgctttagagagctataa
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