Lysinibacillus sp. CD3-6: FH508_0000020
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Entry
FH508_0000020 CDS
T08381
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FH508_0000020 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyc03400
]
FH508_0000020 (recF)
DNA repair and recombination proteins [BR:
lyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FH508_0000020 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
DUF2813
AAA_21
AAA_27
AAA_29
Pept_S41_N_bact
Motif
Other DBs
NCBI-ProteinID:
UED80369
LinkDB
All DBs
Position
3050..4165
Genome browser
AA seq
371 aa
AA seq
DB search
MHIEQLKLTNYRNYDALALNFSPKINVFIGENAQGKTNVMESIYVLAMAKSHRTTNDKEL
IRWDSDYGKIEGAVQKRHGILPIELTITKKGKKGKINHIEQSRLSHYIGQMNVVMFAPED
LNVVKGSPQIRRRFIDMEIGQISPVYLHDLLTFQKILKQRNHYLKMNQGKLMTNDVMYDV
YNEQYIHAATQIIRKRFQFMDLLQEWAEPIHAGISQGKETLVIKYRTVAGIDKGQTTGEI
EDILLKKLIEVKDREFDRGVTMVGPHRDDLQFLVNDYDVQTYGSQGQQRTTALSLKLAEI
ELIKQETNETPILLLDDVLSELDDYRQSHLLNTIQGEVQTFVTTTSVDGIHHETMEHAQL
FHVKQGAIEES
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcatatagagcagttaaaacttacaaattaccgtaattatgacgctttggcgttaaat
ttctctccaaaaataaatgtatttattggtgaaaatgcccaagggaaaacaaatgtcatg
gaatctatctacgtattagcgatggcaaaatcgcatcgtacgacgaacgataaagaattg
atacgttgggattcagactatggtaaaatagaaggggccgttcaaaaaaggcatggtatt
ttaccgattgagcttaccattacgaaaaaaggcaaaaaaggtaagattaatcatattgaa
caaagtcgcctgagccattatatcggtcaaatgaatgtagtgatgtttgcgccagaagat
ttaaatgttgtaaagggaagtccacaaatacgacgacgttttatcgatatggagattggt
caaatttcgccagtctacttacatgatttattaacctttcagaagattttaaaacaacga
aatcattatttgaaaatgaatcagggcaagttaatgactaatgacgtgatgtatgatgtt
tataatgagcagtatattcacgcagctacccaaattattcgaaaaagatttcaatttatg
gatttgttacaagagtgggcagaaccaatacatgcaggaatttcacaaggcaaagaaact
ttagttattaaataccgcaccgtagcaggtattgataagggacagacaacgggtgaaatt
gaagatattttacttaaaaagctaatagaggttaaggaccgcgaattcgatcgtggcgtc
actatggttggaccacatcgagacgatttacaatttttagtgaacgactatgatgtgcaa
acatatggctctcaagggcagcaacgtacaactgcattatcattaaagcttgccgaaatt
gagttaattaaacaagaaacaaatgaaacacccattctacttttagatgatgtattgtcg
gaactcgacgattatcgccaatcgcatttattaaacaccattcaaggtgaagtccaaacc
tttgtaacgactacaagtgttgatggaattcatcatgagacgatggaacatgcacagctg
ttccacgtgaaacaaggtgcgattgaagaaagttag
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