Lysinibacillus sp. CD3-6: FH508_0000540
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Entry
FH508_0000540 CDS
T08381
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FH508_0000540 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lyc01007
]
FH508_0000540 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyc03016
]
FH508_0000540 (lysS)
Enzymes [BR:
lyc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FH508_0000540 (lysS)
Amino acid related enzymes [BR:
lyc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FH508_0000540 (lysS)
Transfer RNA biogenesis [BR:
lyc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FH508_0000540 (lysS)
Prokaryotic type
Other AARSs
FH508_0000540 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
GCR1_C
Motif
Other DBs
NCBI-ProteinID:
UED80451
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All DBs
Position
112928..114430
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AA seq
500 aa
AA seq
DB search
MKQVSNIEELNDQLLVRRQKMTAIQENGQDPFGSRFERTHLSTEVREQFADQTKEQLEEN
LQEVIIAGRIMTKRGKGKAGFAHIQDLGGQIQIYVRQDHVGEEAYDLFKQADLGDIVGVR
GNVFRTQVGELSVKAEGFTFLTKALRPMPEKFHGLQDVEQRYRQRYLDLMTNEDSKKTFI
TRSKIIRAIRNYLDNAGYLEVETPMLHTIAGGAAARPFITHHNALDMELYMRIAIELHLK
RLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMIELYEAYADYKDIMSLTENLIAHVAQEV
LGTTSVRYGEDEINLAVGWRRVHMVDAVKEATGVDFWQPMTKEQAQALAQEHGVEVKAAH
EVGHIINEFFEQKVEETLVQPTFVFGHPVEISPLAKKNPEDERFTDRFELFIVRREHANA
FTELNDPIDQRERFEAQLAEKEAGNDEAHEMDNDFIEALEFGMPPTGGLGIGIDRLIMLL
TNSPSIRDVLLFPTMRHTAK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaagtgtcaaatatagaagagttaaatgatcagcttttggtgagacgtcaaaag
atgactgctattcaagagaatggacaagatccatttggtagtcgatttgaacgtacacac
ttatctacagaagttcgtgaacaattcgcagatcaaacaaaagaacagttagaagaaaac
ttacaagaagttattatcgcaggtcgtattatgacaaagcgcggtaaagggaaagctgga
tttgcgcatattcaagatttaggtggccaaattcaaatctacgttcgtcaagaccatgta
ggtgaagaagcttatgatttatttaagcaagctgacctaggcgatatcgtaggtgtacgt
ggtaacgtattccgtacgcaagtgggagaactttcagttaaggctgaaggatttacattc
ctaacaaaagcgctacgtccaatgccagaaaaattccacggcttgcaggatgtagaacaa
cgttaccgtcaacgttacttagatttaatgacaaatgaagatagcaaaaaaacatttatt
acacgttctaaaattatacgtgctattcgcaactatttagataacgcaggctatttagag
gtggaaacaccaatgcttcatactattgcaggtggtgcagcggctcgtccgttcatcact
caccacaatgcattagatatggaactatatatgcgtatcgctatcgagttgcacttaaaa
cgtttaatcgttggtggactagaaaaagtttatgaaattggtcgtgtattccgtaatgaa
ggaatttcaactcgtcacaatccagagttcacgatgattgagctgtacgaagcatatgcg
gactacaaagatattatgtcgttaacagagaacttaattgcacatgtagcacaagaagta
cttggcacaacatcagttcgatacggtgaagatgagatcaacctagcagtgggttggaga
cgtgttcacatggtagatgctgttaaagaagctacaggtgtagacttctggcaaccgatg
acaaaagaacaagctcaagcacttgctcaagagcatggagtagaagtgaaggctgcacat
gaggttggacatattattaatgaattcttcgagcaaaaagtagaagaaacgctagtacag
ccgacatttgtattcggacacccagtagaaatctctcctttagcgaagaaaaatccagag
gacgagcgttttacagatcgttttgagctgtttatcgtacgtcgtgagcatgcaaatgca
tttacagaactaaatgacccaatcgatcaacgcgaacgctttgaggcacaattagctgaa
aaagaagcgggtaacgacgaagcgcacgaaatggataatgactttattgaagctttagaa
ttcggtatgcctccaacaggtggtttaggtattggtattgaccgtttaatcatgcttctt
acaaactctccatcaattcgtgacgtgttattattcccaacaatgcgccacactgctaaa
taa
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