Lysinibacillus sp. CD3-6: FH508_0002375
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Entry
FH508_0002375 CDS
T08381
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FH508_0002375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyc03400
]
FH508_0002375
Enzymes [BR:
lyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FH508_0002375
DNA repair and recombination proteins [BR:
lyc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FH508_0002375
Prokaryotic type
FH508_0002375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
UED80761
LinkDB
All DBs
Position
510729..511406
Genome browser
AA seq
225 aa
AA seq
DB search
MKEVFPNDWQTILADELEKPYYQQLRQFVAHEYSTQTIYPPISDVMNAFHCTAYRDVKVV
ILGQDPYHGPNQAHGLSFSVKPDVPHPPSLRNMLQELQDDIGCPVPQHGTLTKWAQQGVL
LLNTVLTVRAGQAHSHKNQGWEKFTDAVIEKLAARPKPIIFVLWGKPAQRKKQIIYQHAT
PHVIIEAPHPSPLSAYRGFFGSKPYSKINEQLNDWGEQPIDWCLG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagtattcccaaatgattggcaaacaatactagcagatgaattagaaaaacca
tactaccaacagttacgtcaatttgtggcacatgaatattcgacacagacgatatatcca
ccgataagcgatgtaatgaatgcatttcattgtactgcttatcgtgatgtaaaagttgta
attttagggcaagatccataccatggtccgaaccaagcacatggcttaagtttttctgtg
aagccagatgttccacacccgccaagcttacgcaatatgctacaggaattacaagacgat
attggctgcccagttcctcagcatggtacgttaacgaaatgggcacagcagggtgtcctg
cttttaaatactgtactaacagtcagggcgggacaggcccattctcataagaaccaagga
tgggaaaagttcacagacgctgttattgaaaaactggcagcgcgaccaaaaccaattatc
tttgtgctatggggcaaaccagcacagcgtaaaaagcaaataatttatcaacatgcaaca
ccccatgtcattatagaagcgccacatccaagtccattaagtgcctatagaggctttttt
ggcagcaaaccgtattcaaaaataaatgagcaattaaatgattggggagaacagccaatc
gattggtgtctaggataa
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