KEGG   Lysinibacillus sp. CD3-6: FH508_0003365
Entry
FH508_0003365     CDS       T08381                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
lyc  Lysinibacillus sp. CD3-6
Pathway
lyc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lyc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FH508_0003365 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lyc03400]
    FH508_0003365 (uvrA)
DNA repair and recombination proteins [BR:lyc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FH508_0003365 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FH508_0003365 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_21 RsgA_GTPase nSTAND3 AAA_23 AAA_22 BCA_ABC_TP_C ATPase_2 AAA_25 AAA_18 NACHT Viral_helicase1 cobW MMR_HSR1 DnaJ_CXXCXGXG NB-ARC MeaB Septin IIGP
Other DBs
NCBI-ProteinID: UED80943
LinkDB
Position
748500..751364
AA seq 954 aa
MKNTEIVVQGARAHNLKNINVTIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGKP
ICPNHGIEITSQTIEQMVDRLLVYPERTKMQLLAPMISGRKGTHVKILEDLKKQGFVRVR
IDGELRDLDDAIDLDKNKKHSIEVVVDRVVVKEGIAARLSDSLETALRLAEGRVLVDVME
HEELLFSEHHACPLCGFSIGELEPRMFSFNSPFGACTSCDGLGTTQEVDLDLIVPDWDRS
LLEHAIAPWEPTSSQYYPQLLKAVCDHYDIPMDVPVKDIPKEKMDKVLFGSGKDKIHFHY
ENEFGNVRDQMIEFEGVVRNVERRFKETTSDYVREQMEKYMAQQACPSCKGYRLKPETLA
VKIADQHIGQVTEYSIQDADTFFKELDLSEKDMQIAKLVLREIEERLGFLVNVGLDYLTL
NRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLISTLQNMRDIGNT
LIVVEHDEDTMLAADYLIDVGPGAGVHGGQIVASGTPQEVMDNPKSLTGQYLSGKKFIPL
PIERRKPDGRKLSILGAKENNLQNVKVDVPLGLFVAVTGVSGSGKSTLINEILYKSLAQK
LNRSKVKPGAHKEVTGLEELEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFATTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKD
KSIADILDMTIENAVVFFENIPKIQRKLQTIVDVGLGYMKLGQPATTLSGGEAQRVKLAS
ELHRRSTGKSFYILDEPTTGLHADDIARLLLVLQRLVENGDSVLVIEHNLDVIKTADYII
DLGPEGGDKGGTIVATGTPEEVVEVAGSYTGKYLKPILTRDRMRMEAALAEASK
NT seq 2865 nt   +upstreamnt  +downstreamnt
gtgaaaaatacagaaattgtcgtgcaaggtgcacgagcacataatttaaaaaatataaat
gtcacaattccacgtgaccaattagttgtgataacaggtttatctgggtctggaaagtca
tcattggcgtttgatacgatttacgctgaaggacaacgtcgctatgtcgaatcattatcg
gcatatgctcgccaatttcttggccaaatggataaacccgatgtagatgcaatagaaggg
ctatcgcctgccatttcaatcgatcaaaaaacgacgagccgaaacccacgctcaacagtc
ggaacagttacggaaatttatgattatttgcgtttactatttgctcgtattggcaagccg
atttgtccaaatcacggtattgagattacgtctcaaacgattgagcaaatggtggatcgt
ttgctcgtctacccagaacgtacgaaaatgcaattacttgcaccaatgatttctgggcgt
aaagggacacatgtaaaaatacttgaggatttgaagaagcaaggctttgttcgtgtacga
attgatggagaattacgcgatttagatgatgcaattgatcttgataaaaataaaaagcat
tcgatagaagttgtagtcgatcgtgttgttgtaaaagaaggaattgcagctcgtcttagt
gattcattagaaacagcacttcgattggcggaagggcgcgtacttgtagatgtaatggag
catgaagaattattatttagcgaacatcatgcttgcccattatgtggattttcaattggg
gaattagagcctcgtatgttttcatttaacagtccttttggagcgtgcacaagctgtgac
ggtttaggcacgacacaagaggttgatctggatcttatcgtgccagattgggatcgctca
ttactagagcatgctattgcaccgtgggagcctacaagctcacaatattatccacagcta
ttaaaagctgtatgtgaccattacgatattccaatggatgtacctgtcaaagatatacct
aaagaaaagatggataaggttttatttggctcaggtaaagataaaattcacttccattat
gaaaatgagtttggcaatgtgcgagatcaaatgattgaatttgaaggtgttgttcgtaac
gtagagcgtcgttttaaggagacaacttcggattatgtacgagaacaaatggaaaaatat
atggcacaacaagcttgtccatcatgcaaaggctaccgcttaaaacccgaaacattagca
gtgaaaattgccgatcagcatatcggacaagtaacagagtattcgattcaggatgccgat
acgtttttcaaagagctcgatttatctgaaaaggatatgcaaattgcaaaactagttttg
cgtgaaattgaagaacgactcgggttcttagtgaatgtagggttagactatttaacatta
aatcgtgctgcggggacactttcaggcggggaggctcagcgtattcgcctagcaacgcaa
atcggttctcgcttaacgggtgtgctttatattttagatgagccatcaatagggctacac
cagcgtgataatgaccgtcttattagtacgttacaaaatatgcgtgatattggaaatacg
ctaattgtagttgaacatgatgaagatacaatgctcgcagcggattatcttattgatgtt
ggaccaggggctggtgtacatgggggacaaattgttgcctcaggtacaccacaggaagta
atggataaccctaagtcgttaacagggcaatatttaagtggcaagaaatttattcctctc
ccaatcgagcgtcgtaaaccagatggtcgtaaactatctattttaggagcaaaggaaaat
aaccttcaaaacgttaaagtagatgtaccattaggtctatttgtagcagtgacaggtgtt
tctggctcagggaaatctacgctaattaatgaaattttatataaatctttagcacaaaag
cttaatcgttcaaaggtgaagccaggtgctcataaagaagtcacagggttagaggaattg
gaaaaagtcattgatattgaccaatcaccaatcggaagaacgccacgctcaaatcctgca
acgtatacaggtgtatttgatgatattcgagatgttttcgcaacaacaaatgaggcaaaa
gtacgcggctataaaaaagggcgttttagctttaacgttaaaggtggtcgttgtgaagca
tgtcgtggcgacggaatcattaaaattgaaatgcatttcctgccagatgtttatgtgcca
tgtgaagtttgtcatggaaaacgctacaaccgagaaacactagaagtgaaatataaagat
aaaagtattgcggatattttagatatgacaattgaaaatgcggtagtgttctttgaaaat
attcctaaaatccaacgtaaattacaaacgattgttgatgtagggttagggtatatgaaa
ttaggacaacctgctacgactctctctggtggtgaagcacagcgtgtgaaattggcttca
gaattacatcgccgttcaacaggtaagtcattttacattttagacgagccgacaacgggt
ttacatgcggatgatattgcacgcttattgcttgtgttgcaacgacttgttgaaaatggt
gactctgtacttgttatagagcataatttagatgttattaaaacagcggattacattatt
gacttggggccagagggtggcgacaagggtggtaccattgttgcaacaggaacgccagag
gaagtagtggaagtagctggctcttatacagggaaatatttaaaaccgatattaacacgt
gatcgaatgcgtatggaagctgctttagcagaggcatctaaataa

DBGET integrated database retrieval system