Lysinibacillus sp. CD3-6: FH508_0005190
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Entry
FH508_0005190 CDS
T08381
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FH508_0005190 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyc03400
]
FH508_0005190 (priA)
Enzymes [BR:
lyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FH508_0005190 (priA)
DNA repair and recombination proteins [BR:
lyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FH508_0005190 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
PIF1
T2SSE
ADDB_N
ATPase_2
UvrD-helicase
AAA_19
IBR_1
SLFN-g3_helicase
AAA_30
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UED81289
LinkDB
All DBs
Position
1117947..1120358
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AA seq
803 aa
AA seq
DB search
MSLYAEIIVDVSTYHVDRTFDYAVPEEWLAVIEKGCRVKVPFGPRNVLGFVVGLKNDTDV
PENKIKPIAQILDIEPVFTEEMLLMAKWLKNETICYEIDALQVMLPSALRAKYEKIVTLQ
VEQASLPLEVQEIFGKRHKANFKEFERAGLLPLLKQLIADKIVKIENVVKQQGNVKEVRM
VKIAEDEQALSKALIEASRAAKQRSLIEWMTSHLGEIFTPQQIYEATAVSAAVLQAVIDK
GAACFIQEEVYRDPFTNEVARTQSLQLTDEQAVALNAISHALETHAATTFLLQGVTGSGK
TEVYLQAIQKVLNEGKEAIMLVPEISLTPQMTERFRSRFGEMVAVMHSGLSVGEKYDEWR
KIQQGKVRVVVGARSAIFAPFTNLGLIILDEEHESTYKQEDSPRYHARDVAIWRSQYYQC
PVILGSATPALESYARAKKGVYTLLTLKQRALHQAMPTVYVADMREELQKGNRSMFSELL
IEGIRTRLERREQMVLFLNRRGYSSFVLCRDCGTVVQCPNCDISLTYHRTTEKLKCHYCG
YEEHVPQICPQCQSDHIRYFGTGTQKVEEEIFKLFPEARVLRMDVDTTKHKGAHEEILQA
FGEGQADILLGTQMIAKGLDFPNITLVGVLSADTSLHLPDYRAAERTFQLLTQVSGRAGR
HDKPGEVVIQTYTPEHYAIELAKVQDYEPFYEREMFLRRRSGYPPYYFVALIQVSHEDVM
MAAEYAGRAGDWLRGNLSNQVSIIGPTVASISRLQNRYRYQCLIKYKIEPNLIPVLQRLL
AMYRAEWIKQGILMTVDLDPSTI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatatgctgagattatagtggatgtttcgacataccatgtagatcgcacattt
gactatgctgttcctgaagagtggctagctgtaatagaaaaaggttgtcgtgtgaaagta
ccttttggaccgagaaatgtactaggatttgttgtaggtttaaaaaacgatacagatgtt
cctgaaaacaaaataaagccaatcgcacaaattttagatattgagcctgttttcactgaa
gaaatgctgttgatggcaaagtggttaaaaaacgaaacaatttgttatgaaattgatgct
ttacaagtaatgctaccttctgcacttcgggcaaagtatgaaaaaatagtaacattacaa
gtagagcaagcttcgttgccattagaagttcaggagatttttggaaaacgccataaggca
aactttaaagaatttgaacgtgcgggcttattgccgttattaaagcaactgattgcagat
aaaatcgtaaagatagaaaatgttgtaaagcaacaaggcaatgtgaaagaagtgcgcatg
gtcaaaattgcagaagacgaacaagctcttagtaaagcactgatagaagcatcgagagct
gcaaagcaacggtctttaattgaatggatgacttcacatcttggagaaatattcacgccc
cagcaaatttatgaggcaacagcagtatctgctgctgtattacaagcggtcattgataaa
ggagctgcgtgctttatacaagaagaagtatatcgagatccttttacaaatgaagttgcg
cgtacacaatcactacaattaacagacgagcaggctgttgcattaaatgcaatttcacac
gctcttgaaacacatgccgctacaacttttttattgcaaggtgtaacaggcagtggtaaa
acggaagtctacttacaggcgattcaaaaagttttaaatgaaggtaaagaagcgatcatg
ctagtacctgaaatttctttaacaccgcaaatgacagaacgcttccgtagccgcttcggt
gagatggttgcggtcatgcatagtgggttatctgtaggtgagaagtatgatgaatggcga
aaaattcaacagggtaaagtaagagtagtagttggtgctcgttcagctatttttgcacct
tttacaaatttgggacttatcattttagatgaggagcatgaatctacctacaagcaggag
gactctccacgctatcatgcgcgagatgtagcaatttggcgtagccaatattatcaatgt
cctgtcattttaggtagtgcgacacctgcccttgagtcatatgcccgtgcaaaaaaaggt
gtatacacactacttacattaaaacaacgtgcactacaccaggcgatgccgactgtctat
gtagcagatatgcgagaagaacttcaaaaaggaaaccgctctatgttttctgaactgctt
attgaagggattcgtactcgacttgaacgacgggaacagatggtgttatttttaaatcga
agagggtattcgtcatttgtgctatgtcgtgattgtggtactgtcgtacaatgtccgaac
tgtgatatttcactaacctaccatcgcactactgaaaaactgaagtgtcattactgtggg
tatgaagagcatgtgccacaaatttgtccgcaatgtcaaagtgatcatatacggtatttt
ggaacagggacgcaaaaagtggaagaagaaatttttaagctatttccagaggctagggtg
ctaagaatggatgtggacactacaaagcacaaaggggcacatgaagagattttgcaagca
tttggtgaggggcaagccgacattttactcggtacgcaaatgattgcaaagggacttgat
tttcctaatattacacttgttggtgtgcttagtgctgatacatctctgcatctaccagat
taccgcgcggcggaacggacgtttcagttacttacacaggtaagtggtagggcaggacgc
catgataaaccaggtgaggtcgttattcaaacgtatacgccagagcattatgcaattgaa
ttagctaaagtacaagattacgagccattttatgaacgtgaaatgtttttacgtcgtcgt
tcaggctacccaccttactatttcgttgcgcttatacaagtatcgcatgaagatgtaatg
atggcagccgagtatgctgggcgagctggggattggcttcgagggaatttatcaaatcaa
gtgtctattataggcccaacagttgcaagtattagccgtctccaaaatagatatcgctat
caatgtttgataaaatataaaattgaaccaaatctgatacctgtattgcaacgattgctt
gcaatgtatcgagcagaatggataaaacagggcatattaatgacggttgatttagacccg
tctactatatag
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