KEGG   Lysinibacillus sp. CD3-6: FH508_0005710
Entry
FH508_0005710     CDS       T08381                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lyc  Lysinibacillus sp. CD3-6
Brite
KEGG Orthology (KO) [BR:lyc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lyc03016]
    FH508_0005710 (truB)
Enzymes [BR:lyc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     FH508_0005710 (truB)
Transfer RNA biogenesis [BR:lyc03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    FH508_0005710 (truB)
 Prokaryotic type
    FH508_0005710 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: UED81386
LinkDB
Position
1222665..1223576
AA seq 303 aa
MNGILPLWKERGMTSHDCVFKLRKILRTKKVGHTGTLDPGVEGVLPICIGQATRIAEYLT
DAGKTYEAVISIGRTTTTEDAEGETVAEDNTIKSFTRAELLDVLASLTGIINQTPPMFSA
VKVNGKRLYEYARKGETVERPTRQVTIYALELLDDQEVYEGQDITFPVRISCSKGTYIRT
LAVQIGEALGYPAHMQALVRTASGTFTQDNCFTLAQVAELMETEQINTCILPVEYALSDY
PYIEITSANEKEIFNGQVLPADALLKVHDKIVFGIKGKAFAVYQAHPTKEGYMKPHKMFP
TIE
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaacggtattttaccgctttggaaagaacgtggcatgacaagtcatgattgcgtattt
aaattacgaaaaatattgcgtacaaaaaaagttggccatacgggcacattagatccagga
gtggaaggtgttcttccaatttgtatcggacaggcaacccgcatcgcagaatatttaaca
gatgcagggaagacttatgaggcagtaatttcaattgggcgaacaacgacaactgaagat
gccgaaggagaaacagttgcagaagataacacaattaagtcgtttacacgtgcagaatta
ctcgatgtattagcgtctttaactggtatcattaatcaaacaccaccgatgttttcagct
gtcaaagtaaatggtaaacgtttatatgaatatgcacgtaaaggtgagactgttgaaaga
ccaacaagacaggtaacaatttatgctttagagttactagacgatcaggaagtatacgaa
gggcaggacattacgttccctgtaaggatttcatgtagcaaagggacatatattcgtaca
cttgctgtgcaaattggtgaagcacttggttatcctgcacatatgcaagcacttgttcga
acagcgtcaggtacttttacgcaagacaattgctttacactagcacaagttgccgaatta
atggaaactgaacaaattaatacatgtattctacctgtagaatatgccttatctgactat
ccatatattgaaataacttccgctaatgaaaaagaaattttcaatggacaagtgcttcca
gcagatgcattattaaaggtgcatgataaaattgtgtttggaatcaaagggaaagcattt
gcggtttatcaagcccatccgactaaggaagggtacatgaaaccacataaaatgtttccg
acgatagagtag

DBGET integrated database retrieval system