Lysinibacillus sp. CD3-6: FH508_0006645
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Entry
FH508_0006645 CDS
T08381
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
lyc
Lysinibacillus sp. CD3-6
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
HTH_50
PAS_4
PAS
AAA_2
AAA_5
Mg_chelatase
SNF2-rel_dom
AAA_7
AAA_16
RsgA_GTPase
HTH_8
AAA_3
Peptidase_M23_N
Motif
Other DBs
NCBI-ProteinID:
UED81566
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Position
1411972..1413657
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AA seq
561 aa
AA seq
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MLGNIKISAETIEKLPLASIIYDENFSIKMLNTKAQQAIQFNRQIINHRKLLPLLRKSMS
TDIPLMKYIICASKSYQYFFSRIVDKDKYYILVSINLTWPYQHEYERYKEESEGLNAIFK
CTYDALYISDHQGKTLRVSAACKQLWGVSEEQLIGKNVLELEREGVYQPSITRLVLENNK
KISTVQQTKNNKRLLVVGTPIKNKQGEIMRVINASRDITNIKNLQQEIHHLTSIIHNYQH
ELSQQDSQSISPLIYQSKQLEAVVALAKRVAAVDSTVLILGETGVGKEVFANYIHDMSER
KTKPFLKINCSAIPENLLESELFGYEKGAFTGANREGKIGLFELAHNGTLLLDEIGDMPP
ALQIKLLRVIQEKTLQRIGSAKTIPINVRFIAATHRNLAEEVTKGNFREDLYYRLNVIPI
HVPPLRDRKEDILPLASHFLTNLNNKYYSAKTFNTSFAHKLTTYNWPGNIRELQNVIERC
YVMSDSDYLTSETLAMALNENKKEKSVLVKDIMPLKKCVEYAEMELLQMAFATCQSTVDM
AKLLEVNQSTISRKMAKFNIR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgctaggaaatataaaaatttctgccgaaacgatcgaaaagctgccattggcatccatt
atttacgacgaaaatttttctattaaaatgctaaataccaaagcacaacaagccattcaa
tttaatcgacaaataatcaaccataggaaattacttccgttattaagaaaatccatgtcg
actgatattccgttaatgaaatatattatttgtgccagcaaaagctatcaatatttcttt
tcaaggattgtagacaaagataaatattacatactagtttctatcaatttaacatggccg
taccaacatgaatatgaacgctacaaagaagagagtgaaggattaaatgcgatatttaag
tgtacctatgatgctctttatatatctgaccatcaaggaaaaacattacgggtaagtgca
gcttgtaaacaactatggggggtaagtgaagaacagctaatagggaaaaatgttttagag
ttggaaagggagggggtgtaccaaccttcgattacaagattagtgttagaaaacaacaag
aaaatttcgacggtccaacaaacaaaaaataataaaaggctattagttgtcggaacgcct
attaaaaataagcagggcgaaattatgcgggtaatcaatgcttctagagacattacaaat
ataaaaaatttacaacaagaaatccatcatttgacaagtataattcataactatcaacat
gaactgagccaacaggatagccaatcaataagcccgcttatctatcaaagtaagcaactc
gaagcggtagtagcgcttgccaaacgagtggcagcagtagattcgaccgtcttaatttta
ggagagacaggtgtcggcaaagaggtttttgccaattatattcatgacatgagcgagcgt
aaaacgaagccttttttgaaaatcaattgtagtgctattccagaaaatttattagaatcc
gagttgtttggctatgaaaaaggtgcatttactggcgcaaatagagaaggcaaaatcggc
ttatttgaactagcacataacggtacgttgttgttagatgaaattggcgatatgccacct
gcactccaaataaaattacttcgcgtcattcaagaaaaaacgctacagcgaattggtagc
gccaaaacaatccctattaatgttcggtttatcgcagcaacccatcgaaatcttgctgaa
gaagtgacaaaaggaaattttagagaggatttatattatcgattaaatgttatccccatt
catgtaccgccgttacgtgatcgcaaagaagatatactgcctttagcaagtcatttttta
acgaatttaaataacaaatattattcagccaaaacattcaatacaagctttgcacataag
ttaacaacgtacaactggcctggaaatattagagaattacaaaacgtcattgaacgatgt
tatgtcatgagtgactccgattatctaacaagtgaaacactagcaatggcactaaacgaa
aataaaaaggagaagtctgttctcgtaaaggacatcatgcctttaaaaaaatgtgtagaa
tatgccgaaatggaattattgcaaatggcttttgcaacatgtcaatcaactgttgatatg
gcaaaattattagaagtgaatcaatctaccattagtaggaaaatggccaaatttaatatt
cgataa
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