Lysinibacillus sp. CD3-6: FH508_0009835
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Entry
FH508_0009835 CDS
T08381
Name
(GenBank) FadR family transcriptional regulator
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
lyc
Lysinibacillus sp. CD3-6
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lyc03000
]
FH508_0009835
Transcription factors [BR:
lyc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
FH508_0009835
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
HTH_5
HTH_41
TrmB
DUF4423
Rrf2
HTH_Crp_2
Fe_dep_repress
MarR_2
HTH_46
HTH_24
HTH_DeoR
HrcA_DNA-bdg
TFIIE_alpha
HTH_IclR
FadR_C
HTH_36
DUF6042
DUF2250
CvfB_WH
DNA_pol_alpha_N
GMT-wHTH
LexA_DNA_bind
MarR
DnaD_N
RHH_1
Motif
Other DBs
NCBI-ProteinID:
UED82175
LinkDB
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Position
complement(2042226..2042945)
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AA seq
239 aa
AA seq
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MELKKIKQKKIYEEVSEMLYEKIRAGELKPGDRLDSVEQLAEQLQVSRSAIREALSALKA
MGLIEIKQGSGTFVKSTPSQKLEFPFSTLTLTNKKDISHLLKVRKIIEVGAAASAAIHRT
EEDLQAMLRILDDMKLAQGDGELGEKADFQFHAAISTASQNPLLATILDQISGLMIDTMK
ETRRIWLYSKKTTSEKLYDEHMQIYLAIKQQNEELAKHAMSSHLSNVEEVLMQYFETSY
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtggaattaaagaaaattaaacaaaaaaaaatatatgaagaagtatcagaaatgctctat
gaaaaaattcgagctggtgaactaaaaccaggagatcgtcttgattcagtagagcaactt
gctgaacaattacaggttagtagatctgccattcgagaggcattatccgccctaaaagcg
atgggcttaatcgagatcaaacaaggttctgggacttttgtaaagagcactccttcccaa
aagcttgagttcccattttcaacattaactttaacaaataaaaaagatatttcacactta
ttaaaagttcgaaaaattatcgaagtgggtgctgctgcgagtgccgccatccatcgaaca
gaagaagatttacaagcaatgcttcgtattttagatgatatgaaacttgcacaaggtgat
ggtgagctaggcgaaaaagcagacttccaatttcacgcagcaatttctactgcctctcaa
aatcccctactggcaacaatattggaccaaatatctggattaatgattgacacgatgaaa
gaaacacgccgcatttggctatattcgaaaaaaacaacaagtgaaaaattatacgatgag
catatgcaaatctatcttgctattaagcaacaaaacgaagaactagcaaagcatgcgatg
tcttcacatttgagtaacgtcgaagaagttttaatgcaatactttgaaacaagttattaa
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