Lysinibacillus sp. CD3-6: FH508_0014410
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Entry
FH508_0014410 CDS
T08381
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lyc
Lysinibacillus sp. CD3-6
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyc03016
]
FH508_0014410 (rnz)
Enzymes [BR:
lyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
FH508_0014410 (rnz)
Transfer RNA biogenesis [BR:
lyc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FH508_0014410 (rnz)
Prokaryotic type
FH508_0014410 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
UED78646
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All DBs
Position
complement(2898537..2899469)
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AA seq
310 aa
AA seq
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MQLHFLGTGAGMPSKERNTSALMVKLLDENGEMWLFDCGEATQHQILHTSLKPRKVSKIF
ITHLHGDHIFGLPGFLSSRSFQGGDEPLTIFGPAGLQQWVEQTFALSKTHLTYPLQFVEV
HDGIIYEDEKFTVHASELRHVVPCFGYRIEQKDLPGELLMEKVQTFGVPKGPLLGKLKRG
QDIELENGTIIRAKDVVAPPKKGFILTVLGDTKYCEEAISLADHADILVHEATFDGSTTD
LAASYGHSTNVEAAMVASRAGAKYLLLNHLSARFLPHDLPVFLAEAQAIFPQTFLTSDQS
VFNWSQEKLL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgcaactgcattttttaggaacaggcgcaggcatgccttcaaaggaacgcaatacgagc
gcattaatggtaaagctactagatgaaaacggtgaaatgtggctatttgattgtggagag
gcgacacaacaccaaattttgcatacatcattaaagccacgtaaagtgtcaaaaatattt
atcacgcatttacatggggaccatatttttggtttaccaggatttttgagctcgcggtct
tttcaaggtggagatgagccgctgactatttttggaccagcaggcttacagcaatgggta
gagcaaacatttgcattatcaaaaacacatttaacgtacccattacaatttgtagaagta
cacgatggtattatttacgaggatgaaaagtttacagtgcatgctagtgaattacgtcat
gttgttccatgctttggctaccgaatagagcaaaaggacttacctggtgaattactgatg
gagaaagtacaaactttcggtgtaccaaaaggacctttacttggcaagttgaaaagagga
caagacattgaactagaaaatggaacaatcattagagcaaaggatgttgttgcacctccc
aaaaaaggctttatacttacagttttaggggatacgaaatactgcgaagaagcaatttca
ttggcggatcatgcagatatccttgtacatgaggcaacatttgatgggagcacaaccgat
ttagcagctagctatgggcattcaacaaatgtggaggcagctatggtagctagtagagca
ggtgcaaaatacttacttcttaatcatttaagtgcacgttttttgccacatgatttgcca
gtatttttagcagaagctcaagcaatctttccacaaactttcctcacatcagaccaatcg
gtatttaattggagtcaggagaaattattatag
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