Lysinibacillus sp. CD3-6: FH508_0015825
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Entry
FH508_0015825 CDS
T08381
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FH508_0015825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyc03400
]
FH508_0015825
Enzymes [BR:
lyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
FH508_0015825
DNA repair and recombination proteins [BR:
lyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FH508_0015825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UED78911
LinkDB
All DBs
Position
complement(3166934..3167827)
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AA seq
297 aa
AA seq
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MLLGSHVSMSGKEMLLGSSKEALSYGANTFMIYTGAPQNTRRKPIADLNIMNGLLHMKEH
GMSNIVVHAPYIINIANTEKPETFRLGVDFLQSEIERTAALEATQIVLHPGAHVGAGADA
GIAKIIEGLNEVLSQDYPVQIALETMAGKGTECGRSFDELAKIIDGVTNNERLSVCFDTC
HTHDAGYNIVEDFDGVLNEFDKIIGVDRIKVLHINDSKNVRGAGKDRHENIGFGHIGFDA
LKYVVHHPQLMDVPKILETPFVALNSDAKSKTAPYKYEIEMLRSGEYKPELIDALRG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttacttggctcacatgtttcaatgagcggtaaagaaatgctactcggctctagtaaa
gaagctctttcttatggtgcgaacacctttatgatttacacgggtgctccacaaaacacg
cgtcgaaaaccaattgcagatcttaatattatgaatggtctattacacatgaaagagcat
ggcatgtccaatattgtcgtgcacgctccatacattataaatattgcaaacacagaaaaa
cctgaaaccttccgtcttggtgtagatttcctacaatcagaaattgagcgcacggctgca
ttggaagcaacgcaaattgttttacatcctggtgcacatgtaggcgcaggagcagatgca
ggtattgccaaaattattgaaggtttaaatgaagtgctttcacaagattatcccgtgcaa
attgcattagaaacaatggcaggtaagggaacagagtgcgggcgttctttcgatgagctg
gcaaaaattattgatggtgttacaaataatgagcgcctttctgtatgctttgatacatgc
catacgcatgatgctggctacaatattgtagaagattttgatggtgtgttaaacgagttc
gataagattattggtgtggatcgtattaaggtccttcatataaatgattctaaaaatgtt
cgtggcgcagggaaagaccgtcacgaaaatattggctttgggcatatcggatttgatgct
ttaaaatacgtagtccaccatcctcaattgatggacgtgccaaaaatattagaaacacca
tttgttgcattaaatagtgatgctaaatcaaaaacagcaccttataaatatgaaattgaa
atgttacgtagtggcgagtataaacctgagcttattgacgccctacgaggttaa
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