Lysinibacillus sp. CD3-6: FH508_0017040
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Entry
FH508_0017040 CDS
T08381
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FH508_0017040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyc02000
]
FH508_0017040
Transporters [BR:
lyc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FH508_0017040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UED79146
LinkDB
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Position
complement(3423873..3425684)
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AA seq
603 aa
AA seq
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MNKKLFTLAASATVAAVALAGCVETKSNVENKGDKSDTASTKPVIEVLGMAAQEQDMNIV
RDQLVKNGFDVKLNIQPDFGSYSAQKDAGNYDVAISSWTTVTGNPDYAVRGLFKTGGDYS
VTADETVDKLIDEASTLTGDAAKEKYKELEQALVFDNAYIAPLYISQKFQGIYSKKVNPD
TVRLPKSRAQAWESIAFNDAGKNATDTLVLHQSIGSLTSLDPIKGNDGSINTLNTNMYVR
LVNLSDTDEVVSDGSLSYNHAISENNQEYYFVLRDDINFAKVENGKAVDTGDVVSAEDVV
FSLERAKDQNSVPDHRTYSIHENIDSVEIVSDITSLESVKTADGKSVLDELSDKLPAAIA
QVVTDEASVDNAAGKYQVVKITTPNPFPQVLNYLAHQSGGIVSEAAVKAVNTFDVASYDP
NVNVAYGDQATVTEGATYANHLAASGPYILVQKNDYEATFVKNPAYQVGTDNEPKINNIS
VRFIEDNDSALSALRNGEIDVLQSVPETKIDVVKGDANLTLKTADSNAVSYLLVNPKGRE
VSKSVDLRKAILYSINQDEFISYYQGNKKPAVSTVSPLVDTGLKLTADSSKVKEFLSAYK
ASK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaattatttacacttgctgcatcagcaactgttgcggcggtcgctttggca
gggtgtgtagaaacgaaatcgaatgttgaaaataaaggtgataagtcagatacagcgagc
acaaaacccgttattgaagtgctaggtatggcagcacaagagcaggatatgaatattgtg
cgcgatcagctagtgaaaaatggctttgatgtaaagttaaatattcaaccagacttcggt
tcctactcagcacaaaaggatgctgggaactatgatgtggccatttctagctggacgact
gtaactggaaatccagactatgcagtacgtggcttatttaaaactggtggagattatagt
gtgactgcagatgagacagtcgataaattaattgatgaggcaagtactttaacaggcgat
gctgcaaaagagaaatataaagagcttgagcaagcattagtatttgataatgcatatatt
gcaccgttatatatttctcaaaaattccaaggtatttattcgaaaaaagtaaacccagat
actgtgcgattaccaaaatcacgtgctcaagcatgggaatcaattgcatttaatgatgct
ggcaaaaatgcaacggacacattagtattacatcaatcaataggctcattaacgtctctt
gatccgattaaagggaatgacggttcgattaatacattaaatacaaatatgtatgttcgt
ttagtgaatttatctgatacagatgaagtagtatcggatggttcattatcatataatcat
gctatttctgaaaataaccaagagtactatttcgtgctacgtgatgatattaattttgct
aaagtggaaaatggcaaagcagtagatactggtgatgtagtatcggctgaagatgttgta
ttctcattagaacgtgcgaaagaccaaaattcggtaccagatcaccgcacatattcaatt
catgaaaatattgattccgtagagatagtttcagatattacttcacttgaatctgtgaaa
acagctgacggaaaatcggttttagatgaattatcagataaactaccagcagcaattgcg
caagttgtaacggatgaagcaagtgtcgacaatgcagcaggtaaatatcaagttgtgaaa
attacaacgccaaatccgttcccgcaagtgctaaattatttagcgcaccaatcaggcgga
atcgtctctgaagcggcggttaaagcggttaatacgtttgacgtagcaagctatgatcca
aatgtaaatgttgcatatggtgaccaagcaactgttacagaaggggcaacatatgcaaac
catttagctgcatctggtccttacattttagtgcaaaaaaatgattacgaagcaacattt
gtcaaaaaccctgcttaccaagttggtacagacaacgagccgaaaattaataacataagt
gttcgctttattgaagataatgacagtgcgctatctgcacttcgtaatggtgaaattgac
gtattacaatccgtaccagaaactaaaattgatgtagtaaaaggcgatgccaacttaaca
ttaaaaacagctgatagtaatgcagtctcttatttactcgtaaatccaaaaggtcgcgaa
gtatcgaaatcagtagacttacgtaaagcaattctatactctatcaaccaagatgaattt
attagctattatcaaggtaataaaaaaccagcagtatcaacagtttctccacttgttgac
acgggcttaaagctaacagcagatagctcaaaagtgaaagaatttttaagcgcttataaa
gctagtaaataa
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