Lysinibacillus sp. CD3-6: FH508_0017585
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Entry
FH508_0017585 CDS
T08381
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc00020
Citrate cycle (TCA cycle)
lyc00190
Oxidative phosphorylation
lyc00650
Butanoate metabolism
lyc00720
Other carbon fixation pathways
lyc01100
Metabolic pathways
lyc01110
Biosynthesis of secondary metabolites
lyc01120
Microbial metabolism in diverse environments
lyc01200
Carbon metabolism
Module
lyc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FH508_0017585 (sdhB)
00650 Butanoate metabolism
FH508_0017585 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
FH508_0017585 (sdhB)
00720 Other carbon fixation pathways
FH508_0017585 (sdhB)
Enzymes [BR:
lyc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
FH508_0017585 (sdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_17
Fer4_10
Fer4
Fer4_2
Fer4_16
Fer4_18
Fer4_4
Fer4_21
Fer4_15
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
UED79243
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Position
complement(3517903..3518682)
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AA seq
259 aa
AA seq
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MEIAANTGRMVKVEILRQDTQGGQGYWQKFEVPYRHGMNVISVLMEIQKNPVTATGEKTT
PVSWDMNCLEEVCGACSMVINGRPRQSCSTLIDQLTEPVRLEPMKTFPVVRDLQVDRDRM
FNALKKVKAWVPIDGTYDLGEGPRMPEGKRQWAYELSKCMTCGVCMEACPNVSEKASFIG
PAPLSQVRLFNTHPTGAMIKDERLNAIMGDGGLANCGNSQNCVAACPKGIPLTTSIASLN
RATTVQMFRNFFGSDHYVD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgcagctaatactggaagaatggtaaaagttgaaattttacgtcaagataca
caaggtggccaaggctactggcagaaattcgaagttccttaccgtcatggtatgaacgtt
atttctgtgttaatggagattcaaaaaaatccagtaacagctactggagaaaaaacaaca
ccagtttcatgggacatgaactgtcttgaagaagtttgtggagcatgttcaatggtaatc
aatggtcgtccacgtcaatcatgttcaacactgattgatcaattgactgaaccagttcgc
cttgagccaatgaaaactttcccggttgtacgtgacttacaagtagaccgtgatcgtatg
ttcaatgcactgaaaaaagtaaaagcatgggtaccaatcgatggtacttatgatttaggt
gaaggtcctcgtatgccagaaggtaaacgtcaatgggcttatgaattatctaaatgtatg
acttgtggtgtatgtatggaagcgtgtccaaacgtgtctgaaaaagcttcattcattgga
ccagcaccactatcacaagtacgtctatttaacactcacccaacaggtgcaatgattaaa
gacgaacgtttaaatgcaatcatgggtgacggcggtcttgctaactgcggtaactctcaa
aactgtgtagctgcttgtcctaaaggtatacctttaacaacatctatcgcatctttaaac
cgtgcaacaacagtgcaaatgttccgtaacttcttcggttctgaccattacgttgactaa
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