Lysinibacillus sp. CD3-6: FH508_0018335
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Entry
FH508_0018335 CDS
T08381
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lyc
Lysinibacillus sp. CD3-6
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lyc03009
]
FH508_0018335
Enzymes [BR:
lyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
FH508_0018335
Ribosome biogenesis [BR:
lyc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FH508_0018335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UED79388
LinkDB
All DBs
Position
complement(3688075..3688788)
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AA seq
237 aa
AA seq
DB search
MRLDKLLANMGYGSRKEVKQLLKQKAVSVDGTYVKDAAMHVDPEKQDVVVYGERVVYTEF
VYYMMNKPPGVISATEDLRDETVIDLLDPLHQHFQPFPVGRLDKDTEGLLLLTNDGVLAH
NLLSPKKHVPKVYYAKIEGIVTQEDGEIFARGVELDDGYVTKPGELVILKSAQQSEIELT
IQEGKFHQVKRMFEAVDKRVTYLKRLSMGSLQLDESLALGEYRELTSEELAGLQNRE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataaattactagccaatatgggctacggctcacgaaaggaagttaagcaa
ctcctaaaacaaaaggcggtttctgtagatggcacatatgtaaaggatgcagcaatgcat
gttgatccagaaaagcaagatgttgtcgtctatggtgaacgggttgtctacacagagttt
gtgtactatatgatgaataagcctcctggtgttatttctgcaaccgaagatttacgggat
gagactgtgattgatttactagatcctctgcatcagcattttcaaccgtttcctgttgga
cgtttagataaagatacagaaggcttgttactgttaacgaatgacggtgtattagctcat
aatttattatctcccaagaaacatgtaccaaaagtgtactatgccaaaattgaaggcatt
gttacgcaggaagatggagaaatatttgctcgtggtgttgagttagatgatggctatgta
actaagccaggtgagcttgtcattttaaaatctgcacagcaatcagaaattgaattgacg
atacaagaaggaaaatttcatcaggtaaagcgtatgtttgaagcggttgataaacgtgtt
acctacttaaagcgcctttcgatgggtagcttacaacttgatgaaagcttagcattaggt
gaatatcgtgagttaacgtctgaagaattagcaggcttacaaaatagagaataa
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