Lysinibacillus sp. CD3-6: FH508_0019945
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Entry
FH508_0019945 CDS
T08381
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
lyc
Lysinibacillus sp. CD3-6
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyc03019
]
FH508_0019945 (rapZ)
Messenger RNA biogenesis [BR:
lyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FH508_0019945 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_18
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UED79644
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Position
complement(4003296..4004189)
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AA seq
297 aa
AA seq
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MTVVVESQQCTHELVIITGMSGAGKTVAIQSFEDLGYYCIDNLPPALLTTFLTLLRDSGK
NITRIAAVMDMRGGNFFDSLIGALDHILKEGDIVVRILFLDADDATLVRRYKETRRAHPL
AVTGLPLDGIKQERVLLSEVKGRANFVYNTSNMKPKELREKIVKAFASDADHTFSVNIMS
FGYKHGMPIDADLVFDVRFLKNPYYVEELRPKTGLQTEVSSYVLALEDTQILIQKLTDLF
EFMIPLYKQEGKSQLVIAFGCTGGQHRSVTLAEYFGACLAKKENAVISHRDINRRKD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggtggttgaaagtcaacaatgtacacatgaattggtcattattacaggaatg
tctggagctgggaagacagtagctattcaaagctttgaggatttagggtattactgtatt
gataatttaccaccagcgttactcacgacttttttaactttacttagggattcaggtaaa
aatataacacgtattgcagctgtcatggatatgcgtggcggcaacttttttgattcgcta
attggagcgctcgaccatatattaaaagaaggcgatatcgttgtccgcattttattttta
gatgcagatgatgcaacgcttgtgagacgttataaggaaacgagacgtgcacatccatta
gctgtaactggtttacctcttgatggcattaaacaagaacgcgtactgctatcagaagta
aaaggccgcgctaatttcgtttataatacgtcaaatatgaaaccaaaagagttacgtgag
aaaatcgtgaaagcatttgcaagtgatgcagatcacactttttcagttaatattatgtcc
tttggatataaacacggtatgccaattgatgcagacttagtatttgatgtgcgcttttta
aaaaatccttattatgtagaggaattgcgccctaaaactggtttgcaaacagaagtctct
tcttatgtattagcgttagaggatacacaaatcctaattcaaaaactaacggatttgttt
gaatttatgataccgctttataaacaagaggggaaatcgcaacttgtcattgcttttggt
tgtacaggaggacagcatcgttcggtgactttagcagaatattttggcgcttgcttggcc
aaaaaagaaaatgctgtgatatcgcaccgtgacatcaatcgaagaaaggattga
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