Lysinibacillus sp. CD3-6: FH508_0020945
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Entry
FH508_0020945 CDS
T08381
Name
(GenBank) HAMP domain-containing methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc02020
Two-component system
lyc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FH508_0020945
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FH508_0020945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lyc02035
]
FH508_0020945
Bacterial motility proteins [BR:
lyc02035
]
Flagellar system
Chemotaxis proteins
MCPs
FH508_0020945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
Mce4_CUP1
ATG17_like
Laminin_II
WXG100
IFT57
Laminin_I
TMP_3
BLOC1_2
BORCS6
ZYG-11_interact
DUF948
Spectrin
STX6_10_61_N
TMP_N
Fez1
Sec10_N
COG3_N
DUF1664
Motif
Other DBs
NCBI-ProteinID:
UED79820
LinkDB
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Position
4196489..4198183
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AA seq
564 aa
AA seq
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MNPLFQFKSIKARILSRFIILLVLFVCFTTYTYFSNTNMEKQAKVLVKEDLVVLEASKNL
SMSISVRLSAALSYVVTGDEKYIDTFNKYRQIAEDNNSIVEQYEKTAEREELVVMAREWS
NRVNSEVFEVYKKGDKQLALENLTAMNELVNEVRDGYEEVSDKRYDSITQVGNDVVSTSS
NNKSIGSVVSLILIIAGILLAIFTASRISKPVKIVSNRMRELADGNLRHDKFSVTNQDEI
GQLMLSANDLNDKLQETISSIHNVSETVAASSEELAQSANEVQTGTEQISYTMQELATGT
ETQASTASDLAETMTTFQRNIHETTQEGAELKEHSGHVHDLTTSGKKLMVQSTKQMATIN
DIVLDSVKKVEGLNEQSAEISKLVSVIDEISNQTNLLALNAAIEAARAGEHGKGFAVVAD
EVRKLAEQVQFSVTDISTIVHRIQNETGNVTSSLQSGYEEVRKGTAQLDQTNNTFDQISQ
AIEDMNDNINVISNNLTKISQHSEMINGSIDEMASISQESAAGVEQTTATVEETAATMDE
ITKSANQLAEMAEELNTQLQKFTL
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctttatttcagtttaaatcaatcaaagcacgcattttaagtagatttatcatt
ttattagtattatttgtgtgttttactacttatacttatttttcgaacacgaacatggag
aaacaagcaaaagtacttgtgaaagaagatttagttgttttagaagcaagtaaaaatttg
tctatgtctataagtgtacgattatctgcagctttaagttatgttgtaacaggcgatgaa
aaatacatagatacttttaataagtaccgtcaaattgctgaggataataacagtatcgtg
gagcaatatgaaaaaacagcagaacgtgaagaactagtagtgatggcacgtgaatggagc
aaccgtgttaatagtgaagtttttgaagtttataaaaagggcgacaaacaattagcatta
gaaaatttaacagctatgaatgaacttgtaaatgaagttcgtgatggctatgaagaagtg
tctgataaacgctatgactcgattacgcaagtcggcaatgatgtcgtatcaacaagttca
aacaataaatcaattgggtctgttgtcagtctcattctaattattgcaggcattctttta
gcaatttttacagcaagtcgcatttctaaacccgttaaaattgtttccaatcgtatgaga
gaattagctgatgggaatttgcgacatgataagttttcagttactaatcaagatgagatt
ggacaattaatgctttctgccaatgacttgaatgataaattacaggaaacgattagctct
attcataatgtttctgaaacagttgcagctagcagtgaagaattagcgcaatctgctaac
gaagttcaaacaggtacagaacaaatttcatatactatgcaagagctggctactggaaca
gaaacacaagcgtccacagctagtgatttagcagaaacaatgacaactttccaacgcaac
attcatgaaacaacacaagaaggagcggagttaaaagaacattctgggcatgtacatgac
ttaacaacgtcaggtaaaaaattaatggtccaatcaacaaaacaaatggcgactattaat
gacattgttttagattctgtaaaaaaggtagaaggcttaaacgaacagtctgctgaaatt
tcaaagcttgtttcagtaattgatgagatttcaaaccaaacgaatttgcttgctttaaat
gctgcaattgaagcagcacgtgcaggagagcatggcaaaggctttgcagttgttgcagat
gaggtacgtaagcttgctgaacaagtacaattctctgttactgatatttctacaattgtt
catcgtattcaaaatgaaacaggaaatgtaacgagttctctacaatcaggctacgaggaa
gttcgaaaaggtactgcacaattagatcaaacaaataacacgttcgatcaaatttctcaa
gcgattgaagatatgaatgacaatattaatgtcatttccaataacttaacaaaaatttcg
caacactccgaaatgattaatggctctattgatgaaatggcttctatttcacaagaatct
gcagcaggcgtagagcaaacaactgcaactgtcgaagaaacagcggcaacaatggatgaa
attacaaagagtgctaatcagcttgcagaaatggctgaagagctaaatacccaactacaa
aaatttactttataa
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