Lysinibacillus sp. CD3-6: FH508_0021530
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Entry
FH508_0021530 CDS
T08381
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH508_0021530 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyc03019
]
FH508_0021530 (groL)
03110 Chaperones and folding catalysts [BR:
lyc03110
]
FH508_0021530 (groL)
03029 Mitochondrial biogenesis [BR:
lyc03029
]
FH508_0021530 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lyc04147
]
FH508_0021530 (groL)
Enzymes [BR:
lyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FH508_0021530 (groL)
Messenger RNA biogenesis [BR:
lyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FH508_0021530 (groL)
Chaperones and folding catalysts [BR:
lyc03110
]
Heat shock proteins
HSP60 / Chaperonin
FH508_0021530 (groL)
Mitochondrial biogenesis [BR:
lyc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FH508_0021530 (groL)
Exosome [BR:
lyc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FH508_0021530 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FH508_0021530 (groL)
Exosomal proteins of breast cancer cells
FH508_0021530 (groL)
Exosomal proteins of colorectal cancer cells
FH508_0021530 (groL)
Exosomal proteins of bladder cancer cells
FH508_0021530 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UED79932
LinkDB
All DBs
Position
complement(4339985..4341619)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIKFSEEARALMLQGVDKLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LENPYENMGAKLVAEVASKTNEIAGDGTTTATVLAQAIIREGLKNVTAGANPVGIRKGID
KAVAAALTELHAISRPVSNKEEIAQVAAISAADDEVGQLIAEAMERVGNDGVITIEESKG
FTTELDVVEGMQFDRGYASHYMVTDTDKMEAVLDNPYILITDKKITNIQEVLPLLEQVVQ
QGRPLLMIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAILTGGQVIT
EELGLDLKTADITSLGRAAKVVVTKDYTTIVEGVGGTEAIERRVGQIRAQLADTTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALLNV
YAAVEKAADAVDGDVATGVKIVLRALEEPVRQIANNAGLEGSIIVDRLKREEIGVGFNAA
TGEWVNMMEAGVVDPAKVTRSALQNAASVAALLLTTEAVVADIPEPAAPGMPDMGGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattctcagaagaagctcgtgcattaatgcttcaaggtgtagat
aaattagcaaatgcagtaaaagtgacattaggtcctaaaggtcgtaacgtcgttttagaa
aaaaaattcggttcaccattaattacaaatgatggtgtaacaattgcaaaagaaattgaa
cttgaaaatccatatgaaaacatgggtgcaaaattagtagcagaggttgcttctaaaaca
aatgaaatcgctggtgatggtacaacgactgcgacagttcttgcgcaagcgatcatccgt
gaaggtcttaaaaacgtaacagctggtgcaaaccctgtaggaatccgtaaaggaatcgac
aaagcggtagcagcagcacttacagaattacatgctatttctcgtccagtaagcaacaaa
gaggaaatcgcacaagttgcggcaatttcagctgctgacgacgaagtaggccaactaatt
gcagaagcaatggaacgtgttggtaatgatggtgttattacaattgaggaatctaaaggt
ttcacaacggagttagatgtagtagaaggtatgcaattcgatcgtggctatgcgtctcac
tacatggtaacagatacagataaaatggaagcggttcttgataacccatacattttaatt
actgataaaaaaattacgaatatccaagaagttttaccgctattagaacaagtggtacaa
caaggtcgtccactattaatgattgctgaagacgttgagggtgaagctcttgcaacactt
gtagtgaacaaactacgtggtacattcaatgctgtagccgtaaaagcaccaggcttcggc
gaccgtcgtaaagcaatgcttgaagatatcgctatcttaacaggtggtcaagtcattaca
gaagaattaggcttagaccttaaaactgctgatattacatcattaggccgtgctgcgaaa
gttgttgtaactaaagattatacaacaatcgtagaaggtgttggtggtactgaagcaatc
gagcgtcgcgttggccaaattcgtgcacagcttgctgatacaacttcagaattcgataaa
gaaaaattacaagaacgccttgcaaaattagcaggtggtgtagcagtcattaaagtcggt
gctgcaactgaaacagaattaaaagaacgcaaacttcgcattgaagatgcattgaactca
acacgtgcagcagtagaagaaggtatcgtatcaggtggtggtactgcacttctaaacgtt
tacgcagcagttgaaaaagcagctgatgcagttgatggcgatgtagcaacaggtgtgaaa
attgtgcttcgtgcattagaagagccagttcgccaaattgcaaacaatgcaggtcttgaa
ggttcaatcattgtagatcgtctaaaacgcgaagaaatcggtgttggtttcaacgcagca
acaggcgagtgggtaaatatgatggaagcaggcgtagtagacccagcaaaagtaacacgc
tcagcactacaaaatgcagcttctgtagcagcgctattattaactactgaagcggttgta
gcagatattccagaaccagcagcaccaggtatgcctgatatgggcggcatgggtggcatg
ggcggtatgatgtaa
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