Lysinibacillus sp. CD3-6: FH508_0021665
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Entry
FH508_0021665 CDS
T08381
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
lyc
Lysinibacillus sp. CD3-6
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyc03021
]
FH508_0021665 (sigB)
Transcription machinery [BR:
lyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FH508_0021665 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_37
Sigma70_ECF
DUF134
DUF1492
HTH_28
HTH_50
GerE
HTH_10
HTH_3
HNF-1_N
UPF0122
NirdL-like_HTH
IF2_N
PhyR_sigma-like
KORA
Motif
Other DBs
NCBI-ProteinID:
UED79946
LinkDB
All DBs
Position
complement(4361755..4362540)
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AA seq
261 aa
AA seq
DB search
MSKESLHKSSSKEDVLKWIAQYQTTEDEEAQTNLVIHYRNLVESIARKYSYGKSYYDDIV
QVGMLGLLGAIRRFDASFGRSFEAFAVPTIVGEIKRFLRDKTWDVHVPRRIKEIGPRIKS
TVESLTIEFQRSPSIQEIAERLEVPEEEVLEAMEMSRSYQALSMDHSIESDNDGSTVTLA
DIMGKEDMGYEMTNRRMIVADAMEVLNEREKQVIQLTYLEQLSQKEAGEQLGISQMHVSR
IQRKAIKKLQEVVLASGSVPL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaatcactacataaatcttcttcaaaggaagatgtattaaagtggatagca
cagtaccaaacaactgaggatgaagaagcacaaaccaatttggttattcattatcgaaat
ttagttgaatccatcgcacgcaaatattcgtatggtaaatcttattatgatgatattgtg
caagtaggaatgttggggttactaggtgcaattagacgttttgatgcaagttttggccgc
agttttgaggcatttgcagtaccaactattgttggagagattaagcgatttttacgagat
aaaacatgggacgtacatgtgccaagacgaattaaagagatagggccacgtattaaatcg
actgtagaatcgttaacaatagaattccaacgctcaccttctattcaagaaattgctgag
cgtttagaggtaccagaagaagaagttttagaagcgatggagatgagtcgcagttatcaa
gcactttcaatggatcattcaatagaatcagataatgacggaagtactgtcactctagct
gatattatgggtaaagaagatatgggttatgaaatgaccaatagaaggatgattgttgct
gatgctatggaagttttaaatgaacgagaaaagcaagttatccagcttacttatctagaa
cagcttagccaaaaagaagcgggagaacaattgggcatttctcaaatgcatgtatcaaga
attcaacgaaaagcaattaaaaaattacaagaagtcgttcttgcaagtggtagtgtaccg
ctgtga
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