Protaetiibacter intestinalis: D7I47_01625
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Entry
D7I47_01625 CDS
T05661
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyd
Protaetiibacter intestinalis
Pathway
lyd03420
Nucleotide excision repair
lyd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D7I47_01625
03430 Mismatch repair
D7I47_01625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyd03400
]
D7I47_01625
Enzymes [BR:
lyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7I47_01625
DNA repair and recombination proteins [BR:
lyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7I47_01625
MMR (mismatch excision repair)
Other MMR factors
D7I47_01625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
MSP1b
Motif
Other DBs
NCBI-ProteinID:
AYF97074
UniProt:
A0A387B0Q5
LinkDB
All DBs
Position
complement(328694..331924)
Genome browser
AA seq
1076 aa
AA seq
DB search
MTESASARPTVSAARIAEALGEVRARSGGDGTVRYPTPEQTAVIEADPREPALVVAGAGS
GKTETMANRVLWLVANGHVAPAEVLGLTFTRKAAGELAERIRVRLAELHEAGLTPEGHDL
FDAPEISTYNAFASAVFRDNALVLGRDGEGVVLGEAAAWQLARSVVIRSVDPRLELLDKR
LDAVVDATLRIAAGLADNAADPERVRQLGARFAELRELPLGDRYERADMLTVIDDVAQLE
LLVDLAAEYDAAKRERGAVDYADQVVLALRAVEKRAEAGEELRARFRVVLLDEYQDTSVV
QTELLARLFAGTAVTAVGDPNQSIYGWRGASAANLGEFRERFRAGDGGPARDFTLATSWR
NGERILDAANALVAGGATAIPVPTLTARPGASTARVDRVFAETVGEEATQVARWLRDRLA
EHRARAGRPGTAALLLRARKTQPRFLAALADAGVPYHVLGVGGLLAEPEIADLVSALRVI
ESPDAGLELVRLLAGARWRVGVADLDALREVSGWLARHDAAESGILSDEVQQRMRDSVAD
GEGGSIVDALEFVGRVPETHRALEAFSPEGLARLRDASRFFEQLRARAGLELPELVVLVA
HELRLDLELAANETRTAGEANLDALLDALSGYLSIAETANLGGFLGWLKEAEQREDLTPR
PEDPEPGTVQVLTVHGAKGLEWDAVAVPRLVEEELPARPLEGYGGWLAFGRFPWPERGDA
AQLPRFRLEVLDSRKAFKAELDRFKEEVAEHYRAEERRLAYVAVTRARDHLLVSGSFWSG
QTRPRTPSRFLRELADAGVVDGLPEAPADDAPPPGAEPETTRWPHEPFGARAAAVHAAAA
AVRTAAPALTGTWAREAELLLEERERRRTRDGAVPLPARIPASAFKDYVSDPDAVAEELR
RPMPERPYRATRLGTLFHSWVEERYGTAGGGADELDAAPFELDDEGDVVDAERLAELQAT
FARSEWAALKPVEVEREIHLPFAGRIVICKIDAVYRHGDRFEVVDWKTGKAPRDDADLER
KQLQLALYRLAYARREGIDPALIDAAFYFVADDEVIRPPHVDSEQELLERWTAAFG
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgactgagtcggcatccgcgcgcccgaccgtgagcgccgcccgcatcgcggaggcgctc
ggcgaggtgcgcgcccggagcgggggcgacggcaccgtgcgctatccgacccccgagcag
accgcggtcatcgaggccgacccgcgtgagcccgcgctcgtggtggcgggggcgggttcc
ggcaagaccgagacgatggcgaaccgcgtgctgtggctcgtcgcgaacggccacgtcgcc
cccgccgaggtgctcggcctcaccttcacccgcaaggcggccggcgagctcgccgagcgc
atccgcgtgcgcctcgccgagctgcacgaggcggggctcacccccgaggggcacgacctg
ttcgacgcccccgagatctccacctacaacgccttcgcgagcgcggtcttccgcgacaac
gcgctcgtgctgggtcgcgacggcgagggcgtcgtgctcggcgaggcggccgcctggcag
ctcgcccgctcggtcgtcatccgcagcgtcgacccgcggctcgagctgctcgacaagcgc
ctcgacgcggtggtcgacgccaccctccgcatcgccgcggggctcgccgacaacgcggcc
gaccccgagcgggtgcggcagctcggcgcgcgcttcgccgagctgcgcgagctgccgctc
ggcgaccgctacgagcgcgccgacatgctcacggtgatcgacgacgtggcgcagctcgag
ctgctcgtcgacctcgccgccgagtacgacgccgcgaagcgcgagcgcggcgccgtcgac
tacgccgaccaggtggtgctcgccctgcgggccgtcgagaagcgtgcggaggcgggcgag
gaactgcgggcccggttccgcgtcgtgctgctcgacgagtaccaggacacctccgtcgtg
cagaccgagctgctcgcacggctcttcgcgggcaccgccgtcactgcggtcggcgacccg
aaccagtcgatctacggctggcgcggcgcgagcgcggcgaacctcggcgagttccgcgag
cggttccgggcgggcgacggcggcccggcccgcgacttcaccctggcgacgagctggcgc
aacggcgaacgcatcctcgacgccgcgaacgcactcgtcgcggggggcgcgaccgccatc
ccggtgccgacgctcaccgcgcgcccgggggcgagcaccgcccgggtcgaccgcgtcttc
gccgagacggtcggcgaggaggcgacgcaggtggcccgctggctgcgcgaccggctcgcc
gagcaccgggcgcgcgcggggcgtccgggcaccgcggcgctgctgctgcgggcgcgcaag
acgcaaccgcgcttcctcgcggcgctcgccgacgcgggcgtgccgtatcacgtgctcggc
gtcggcgggctgctcgccgagcccgagatcgccgacctggtgagcgccctgcgggtgatc
gagagcccggatgcgggactcgagctcgtgcggctgctcgccggtgcgcgctggcgcgtc
ggcgtcgccgacctggatgcgctgcgcgaggtgtcgggctggctcgcccggcacgacgcg
gccgagagcggcatcctctccgacgaggtgcagcagcgcatgcgcgactcggtcgccgac
ggcgagggcggctcgatcgtcgacgcgctcgagttcgtgggccgggtgcccgagacgcat
cgcgccctcgaggcgttcagcccggaggggctcgcccgactgcgcgacgcatcccggttc
ttcgagcagttgcgggcgcgtgcgggcctcgaactgcccgagctcgtcgtgctcgtcgcc
cacgagctgcggctcgacctcgagctggccgcgaacgagacccgcaccgcgggcgaggcg
aacctcgacgcgctgctcgacgcactctccggctacctgtcgatcgccgagacggcgaac
ctcggcggcttcctcggctggctgaaggaggccgagcagcgtgaggatctgaccccgcgc
ccggaggatccggagcccggcaccgtgcaggtgctcaccgtgcacggcgcgaagggcctc
gagtgggatgcggtcgccgtgccgcgcctcgtcgaggaggagctgcccgcccgcccgctc
gagggctacggcggctggctcgccttcggccgcttcccctggcccgagcgcggcgacgcg
gcgcagctgccgaggttccggctcgaggtgctcgactcgcgcaaggcgttcaaggccgag
ctcgaccgtttcaaggaggaggtggccgagcactaccgtgccgaggagcgccgcctcgcc
tacgtcgccgtcacgcgtgcgcgcgaccacctgctcgtctcgggctcgttctggagcggg
cagacgaggccgcgcacgccgagtcgcttcctgcgggagctcgccgacgcgggcgtcgtg
gacgggctgccggaggccccggcggacgacgcgccgccgcccggcgccgagcccgagacg
acccgctggccgcacgaaccgttcggcgcccgcgccgcggccgtgcacgccgcggcggcc
gccgtgcgcaccgccgcgcccgcgctgaccggaacgtgggcgcgcgaggccgagctgctg
ctcgaggagcgcgagcggcgccgcacccgcgacggagccgtgccgctgccggcgcgcatc
ccggcatccgcgttcaaggactatgtgagcgacccggatgccgtggccgaggagctgcgt
cgcccgatgcccgagcgcccctaccgggcgacgcggctcggcaccctcttccactcgtgg
gtggaggagcgctacggcacggcgggcggtggcgccgacgagctcgacgcggcgcccttc
gagctcgacgacgagggcgacgtcgtggatgcggagcggctcgccgagctgcaggcgacg
ttcgcgcggtcggagtgggcagcgctgaagcccgtcgaggtggagcgcgagatccacctg
ccgttcgcggggcgcatcgtgatctgcaagatcgacgccgtctaccggcacggcgaccgc
ttcgaggtggtcgactggaagaccggcaaggcgccgcgcgacgacgccgacctggagcgc
aagcagctgcagctcgccctctaccgcctcgcctacgcccggcgtgagggcatcgacccg
gcgctcatcgacgccgccttctacttcgtggccgacgacgaggtcatccgcccgccgcac
gtcgactcggagcaggaactgctcgagcgctggaccgccgcgttcggctga
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