Protaetiibacter intestinalis: D7I47_04170
Help
Entry
D7I47_04170 CDS
T05661
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lyd
Protaetiibacter intestinalis
Pathway
lyd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lyd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D7I47_04170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyd03021
]
D7I47_04170
03400 DNA repair and recombination proteins [BR:
lyd03400
]
D7I47_04170
Enzymes [BR:
lyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D7I47_04170
Transcription machinery [BR:
lyd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D7I47_04170
DNA repair and recombination proteins [BR:
lyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D7I47_04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AYF97533
UniProt:
A0A387B548
LinkDB
All DBs
Position
complement(858804..859796)
Genome browser
AA seq
330 aa
AA seq
DB search
MLIAQRPTLSEDNISEFRSAFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRLDGIQ
HEFDTIPGVKEDVVEIVLNIKNLVVSSEHDEPITAYLRKQGAGEVTAADISAPAGVEIHN
PELVIATLNDKAKFDLELTIERGRGYVSATQNRSEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKPAISPRDAIASAGRTLVELFGLARELNTAAEGIEIGPAPVD
AVLSSELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVKDK
LVELGLSLKDSVPGFDGAHFYGGYDDDETV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgtcccactctctccgaggacaacatctcggagttccgctccgcg
ttcgtgatcgagcccctcgagcccggcttcggctacacgctcggcaactcgctgcgtcgc
accctgctgtcgtccatcccgggcgccgccgtcacgagcatccgcctcgacggcatccag
cacgagttcgacaccatccccggtgtcaaggaggacgtcgtcgagatcgtcctcaacatc
aagaacctcgtggtctcgagcgagcacgacgagccgatcaccgcctacctgcgcaagcag
ggcgccggtgaggtgaccgccgccgacatctcggcgccggcgggtgtggagatccacaac
cccgagctcgtcatcgcgaccctcaacgacaaggccaagttcgacctcgagctcaccatc
gagcgcggtcgcggctacgtgtcggccacccagaaccgcagcgagttcagcgaggccggc
cagatcccggtcgactcgatctactcgcccgtgctcaaggtgacctaccgcgtcgaggcg
acccgtgccggtgagcgcaccgacttcgaccgcctggtcgtggacgtcgagacgaagccg
gcgatctcgccgcgcgacgccatcgcctccgccggccgcaccctcgtcgagctgttcggc
ctcgcccgcgagctcaacaccgcggccgagggcatcgagatcgggcccgccccggtcgac
gcggtgctctcgagcgagctgtcgatgccgatcgaggacctcgacctctcggtgcgctcg
tacaactgcctcaagcgcgagggcatcaacaccgtcagcgagctcgtcgccctctcggag
acgcagctcatgaacatccgcaacttcggtcagaagtccgtggacgaggtgaaggacaag
ctcgtcgagctcggcctctcgctcaaggacagcgtgcccggcttcgacggtgcgcacttc
tacggcggatacgacgacgacgagaccgtctga
DBGET
integrated database retrieval system
