Protaetiibacter intestinalis: D7I47_05100
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Entry
D7I47_05100 CDS
T05661
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lyd
Protaetiibacter intestinalis
Pathway
lyd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7I47_05100 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyd03019
]
D7I47_05100 (recQ)
03400 DNA repair and recombination proteins [BR:
lyd03400
]
D7I47_05100 (recQ)
Enzymes [BR:
lyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7I47_05100 (recQ)
Messenger RNA biogenesis [BR:
lyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D7I47_05100 (recQ)
DNA repair and recombination proteins [BR:
lyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D7I47_05100 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
HRDC
Helicase_C
HHH
Motif
Other DBs
NCBI-ProteinID:
AYF97691
UniProt:
A0A387B7D7
LinkDB
All DBs
Position
complement(1048519..1050435)
Genome browser
AA seq
638 aa
AA seq
DB search
MPAPLEVLHRVFGYAGFRGDQGAIIDRVVGGGDAVVLMPTGGGKSLCYQIPALVRQGTGV
VISPLIALMQDQVDALAALGVRAAFLNSTQNPDERRLVEQELLAGELDLLYLAPERLKLE
SARELFDRAPIALFAIDEAHCVSQWGHDFRPDYLGLSVLHERWPTVPRIALTATATAATR
HEIVERLELQGAQQFVSSFDRPNIQYRIEPKNQPLAQLLQLIRTEHPGDAGIVYCLSRAS
VEKTADALVAEGIPALPYHAGLDAGVRARNQARFLREDGIVMVATIAFGMGIDKPDVRFV
AHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRRMIQESEGDAAYKRRASQH
LDAMLALCETVECRRVQLLNYFGQASEPCGNCDTCLAPPEAWDGTVPAQKLLSTIVRLQR
ERNQRFGAGHLIDILLGRDTERIRQQRHDELRTYGIGGELGEQEWRGVVRQLLAQGLLAV
NTDGYGTLVITEASASVLDGSRTVSLRREPERVAKQKKRSAGAELPEAAQPLFERLRAWR
ADVARAQGVPAYIVFGDATLRGIALTEPASLAELGTVSGVGEKKLEAYGAAVLALVAGDE
PPAPAPAVASAPASAPTPAAPDDDYPPLTDDDAPPLDF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccccctcgaggtcctccaccgcgtcttcggctacgccggattccgcggcgac
cagggcgccatcatcgaccgggtggtgggcggcggcgacgcggtcgtgctcatgcccacg
ggcggcggcaagtcgctgtgctaccagatccccgccctcgtgcggcagggcacgggcgtc
gtcatctcgcccctcatcgccctcatgcaggaccaggtcgatgcgctcgccgcgctcggg
gtgcgggcggcgttcctcaactccacgcagaaccccgacgagcgacggctcgtcgagcag
gagctgctcgcgggcgagctcgacctgctctacctcgcgcccgagcggctgaagctcgag
agcgcgcgcgagctgttcgaccgcgccccgatcgccctgttcgcgatcgacgaggcgcac
tgcgtctcccagtgggggcacgacttccgccccgactacctcggcctctcggtgctgcac
gagcgctggcccaccgtgccgcgtatcgccctcaccgccacggccaccgccgccacccgt
cacgagatcgtcgaacggctcgaactgcagggcgcgcagcagttcgtgtcgagcttcgac
cgccccaacatccagtaccgcatcgagcccaagaaccagccgctcgcgcagctgctgcag
ctcatccgcaccgagcatccgggcgatgcgggcatcgtctactgcctctcgcgcgcctcc
gtcgagaagacggccgatgctctcgtggccgagggcatcccggcgctgccgtaccacgcg
gggctggatgcgggggtgcgcgcccgcaaccaggcgcggttcctgcgcgaggacggcatc
gtcatggtcgccacgatcgccttcggcatgggcatcgacaagccggacgtgcgcttcgtc
gcccacctcgacctgccgaagtcggtcgagggctactaccaggagacggggcgtgcgggc
cgcgacggcctgccgtcgacggcgtggctcgcctacggcctgcaggacgtcgtgcagcag
cggcgcatgatccaggagtcggagggcgacgccgcctacaagcggcgcgcatcccagcac
ctggacgccatgctcgccctctgcgagacggtcgagtgccgccgggtgcagctgctgaac
tacttcgggcaggcctccgagccgtgcggcaactgcgacacctgcctcgcgccgcccgag
gcgtgggacggcacggtgccggcccagaagctgctgtcgacgatcgtgcgcctgcagcgc
gagcgcaaccagcgcttcggcgccgggcacctcatcgacatcctgctcgggcgcgacacc
gagcgcatccgtcagcagcggcacgacgagctgcgcacctacggcatcggcggcgagctc
ggcgagcaggagtggcgcggggtggtgcggcagctgctcgcgcaggggctgctcgccgtc
aacaccgacggctacggcacgctcgtgatcaccgaggcctcggcatccgtgctcgacgga
tcgcgcacggtgtcgctgcggcgcgagccggaacgggtcgccaagcagaagaagcgcagc
gcgggcgccgagctgcccgaggcggcgcagccgctcttcgagcgcctgcgggcgtggcgt
gccgacgtcgctcgcgcgcagggcgtgcctgcctacatcgtcttcggcgacgcgacgctg
cgcggcatcgccctcaccgagcccgcgagcctcgccgagctcggcaccgtctcgggcgtc
ggtgagaagaagctcgaggcctacggcgccgcggtgctcgccctcgtcgcgggcgacgag
ccccccgcgcccgcgccggccgtggcatccgcccccgcatccgcccccactcctgcggcc
ccggacgacgactacccacccctcaccgacgacgacgccccgcccctcgacttctga
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