Protaetiibacter intestinalis: D7I47_05895
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Entry
D7I47_05895 CDS
T05661
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lyd
Protaetiibacter intestinalis
Brite
KEGG Orthology (KO) [BR:
lyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyd03032
]
D7I47_05895 (gyrB)
03400 DNA repair and recombination proteins [BR:
lyd03400
]
D7I47_05895 (gyrB)
Enzymes [BR:
lyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D7I47_05895 (gyrB)
DNA replication proteins [BR:
lyd03032
]
Prokaryotic type
DNA Topoisomerases
D7I47_05895 (gyrB)
DNA repair and recombination proteins [BR:
lyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D7I47_05895 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AYF97837
UniProt:
A0A387B666
LinkDB
All DBs
Position
1220850..1222820
Genome browser
AA seq
656 aa
AA seq
DB search
MNSPSSRPAPDNYGAEAIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSVDESLA
GYCDDILVTILADGGLRVVDNGRGIPVAEHPVEKRSTVEVVLTVLHAGGKFGGGGYAVSG
GLHGVGSSVVNALSHRLEVDVQREGFHWTMAFHDGVPDAPLAKGAKSELTGTTITFWPND
DIFETVEFDYETLRTRFQQTAFLNKGLRIEITDEREVDEEGAFRNEVFFYERGLADYVDY
LNAAKKADIIHPEIISFEAEDTERHMALEIAMQWTTAYSESVHTYANVINTHEGGTHEEG
FRAALTTLVNKYAREKGLLKEKDENLSGDDVREGLTAVISIKLSEPQFEGQTKTKLGNTE
AKSFVQRVVGEQLNDWFDRNPNQAKDVIRKAIQAATARIAARKAREQTRRKGLLEGGGMP
GKLSDCSSKDPSRSEIFLVEGDSAGGSAKTGRNPETQAILPLRGKILNVEKARLDRALGN
AEIQAMITAFGTGIGEDFDGEKARYHKIVLMADADVDGQHITTLLLTLLFRYMRPLIEMG
YVYLAMPPLYRIKWTNADHEYVYSDRERDAVMEAGLAAGRRLQKENGVQRYKGLGEMNHQ
ELWDTTMNPETRTLKQVTLDDAAIADGVFATLMGDDVDARRQFIQTNAADVRFLDI
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaattccccctcttcgcgtcctgcgccggacaactacggcgccgaagccatccaggtt
ctcgagggtctcgaagcggtccgcaaacgccccggcatgtacatcgggtcgacggggccg
cgcggtctgcaccacctcgtctacgagatcgtcgacaactcggtcgacgaatccctcgcg
gggtactgcgacgacatcctcgtgacgatcctcgccgacggcggcctgcgcgtcgtcgac
aacggccgcggcatcccggtggccgagcaccccgtcgagaagcgctccaccgtggaggtc
gtgctcaccgtgctgcacgcgggcggcaagttcggcggcggcgggtacgccgtctcgggc
ggtctgcacggcgtcggcagctcggtcgtgaacgccctctcgcaccgcctcgaggtggac
gtgcagcgcgagggcttccactggacgatggcgttccacgacggggtgccggatgcgccg
ctcgcgaagggcgcgaagtcggagctcaccggcacgacgatcaccttctggccgaacgac
gacatcttcgagacggtcgagttcgactacgagaccctgcgcacccgcttccagcagacc
gcgttcctcaacaagggcctgcgcatcgagatcaccgacgagcgcgaggtcgacgaggag
ggcgccttccgcaacgaggtgttcttctacgagcgcggcctcgccgactacgtggactac
ctgaacgccgccaagaaggccgacatcatccaccccgagatcatctccttcgaggcggag
gacaccgagcgccacatggccctcgagatcgcgatgcagtggacgaccgcctactcggag
agcgtgcacacctacgcgaacgtcatcaacacccacgagggcggcacccacgaggagggc
ttccgcgcggcgctcacgaccctcgtgaacaagtacgctcgcgagaaggggctgctcaag
gagaaggacgagaacctctccggcgacgacgtgcgcgagggcctcaccgccgtcatctcg
atcaagctcagcgagccgcagttcgagggccagacgaagacgaagctcggcaacaccgag
gcgaagtcgttcgtgcagcgggtggtcggcgagcagctgaacgactggttcgaccgcaac
ccgaaccaggcgaaggatgtgatccgcaaggccatccaggcggccacggcccgcatcgcc
gcgcgcaaggcgcgcgagcagacccgccgcaagggtctgctcgagggcggcgggatgccg
ggcaagctctccgactgctcgagcaaggacccgtcgcgttccgagatcttcctcgtcgag
ggcgactcggccggcggttcggcgaagaccggccgcaacccggagacgcaggcgatcctg
ccgctgcgtggcaagatcctcaacgtcgagaaggcgcggctcgaccgggcgctcggcaac
gccgagatccaggcgatgatcacagccttcggcaccggcatcggcgaggacttcgacggc
gagaaggcccggtaccacaagatcgtgctgatggcggatgccgacgtcgacggccagcac
atcacgacgctgctgctgaccctgctgttccgctacatgcggccgctcatcgagatgggc
tacgtctacctcgcgatgccgccgctgtaccgcatcaagtggacgaacgccgaccacgag
tacgtgtactccgaccgcgagcgcgacgccgtcatggaggcgggcctcgcggccggccgc
cgactccagaaggagaacggcgtgcagcgctacaagggtctcggcgagatgaaccaccag
gagctgtgggacaccacgatgaacccggagacccgcaccctgaagcaggtgacgctcgac
gacgcggcgatcgccgacggcgtgttcgcgaccctcatgggcgacgacgtggacgcgcgc
cgccagttcatccagacgaacgcggccgacgtgcgcttcctggacatctaa
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