Protaetiibacter intestinalis: D7I47_08720
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Entry
D7I47_08720 CDS
T05661
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lyd
Protaetiibacter intestinalis
Pathway
lyd00521
Streptomycin biosynthesis
lyd00523
Polyketide sugar unit biosynthesis
lyd00525
Acarbose and validamycin biosynthesis
lyd00541
Biosynthesis of various nucleotide sugars
lyd01100
Metabolic pathways
lyd01110
Biosynthesis of secondary metabolites
lyd01250
Biosynthesis of nucleotide sugars
Module
lyd_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lyd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D7I47_08720 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D7I47_08720 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D7I47_08720 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D7I47_08720 (rfbB)
00525 Acarbose and validamycin biosynthesis
D7I47_08720 (rfbB)
Enzymes [BR:
lyd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D7I47_08720 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Sacchrp_dh_NADP
NmrA
KR
adh_short
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AYF98329
UniProt:
A0A387BBJ7
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All DBs
Position
complement(1841265..1842263)
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AA seq
332 aa
AA seq
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MRILVTGGAGFIGSNFVHHLVEHTDHTVTVLDKLTYAGNLASLEGLPTERVEFVKGDIAD
ASLVDELFGRHDAVVHYAAESHNDNSLNDPRPFLDTNIIGTYTLLEAARRHGIRFHHIST
DEVYGDLELDDPARFTENTPYNPSSPYSSTKAGSDLLVRAWVRSFGVQATISNCSNNYGP
YQHVEKFIPRQITNVLRGERPKLYGTGENVRDWIHADDHSSAVLTILEKGVIGETYLIGA
DGEKNNKDVVESILTELGQPADAYDLVTDRPGHDLRYAIDSTKLRTELGWAPRYGDFAAG
LAATIAWYRDNEAWWAPQKEATEAKYRASGQA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcgtcaccggcggagccggtttcatcggctcgaacttcgtgcatcacctc
gtcgaacacaccgaccacaccgtcacggtgctcgacaagctcacctacgccggcaacctc
gcctcgctcgagggactgccgaccgagcgcgtcgagttcgtgaagggcgacatcgcggat
gcatcgctcgtcgacgaactgttcggccgccacgacgcggtcgtgcactacgcggccgag
agccacaacgacaactcgctgaacgacccccggcccttcctcgacaccaacatcatcggc
acctacacgctgctcgaggcggcgcggaggcatggcatccgcttccaccacatctccacc
gacgaggtctacggcgacctcgaactcgacgaccccgcgcggttcaccgagaacacgccg
tacaacccgtcgagcccgtactcgagcaccaaggcgggcagcgatctgctcgtgcgcgcc
tgggtgcgctccttcggcgtgcaggcgacgatctccaactgctccaacaactacgggccg
taccagcacgtcgagaagttcatcccccgccagatcaccaacgtgctgcgcggcgagcgg
cccaagctctacggcacgggagagaacgtgcgcgactggatccacgccgacgaccactcc
tccgcggtgctgacgatcctcgagaagggcgtcatcggcgagacctacctcatcggtgcc
gacggcgagaagaacaacaaggacgtcgtcgagtcgatcctcaccgaactcgggcagcct
gcggacgcctacgacctggtcacggaccgccccgggcacgacctgcgctacgcgatcgac
tcgacgaagctgcggaccgaactcggctgggccccccgctacggcgacttcgccgcgggt
ctcgccgcgacgatcgcctggtaccgcgacaacgaggcctggtgggcgccgcagaaggag
gccacggaggccaagtaccgggcgtccggccaggcatga
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