Protaetiibacter intestinalis: D7I47_11790
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Entry
D7I47_11790 CDS
T05661
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lyd
Protaetiibacter intestinalis
Brite
KEGG Orthology (KO) [BR:
lyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyd03016
]
D7I47_11790 (truB)
Enzymes [BR:
lyd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D7I47_11790 (truB)
Transfer RNA biogenesis [BR:
lyd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D7I47_11790 (truB)
Prokaryotic type
D7I47_11790 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
DUF3577
Motif
Other DBs
NCBI-ProteinID:
AYF98866
UniProt:
A0A387BCN0
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All DBs
Position
2492178..2493092
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AA seq
304 aa
AA seq
DB search
MTSGVLLVDKPQGVTSHDVVARARRILGTRKVGHAGTLDPMATGLLLLGVDSATRLLTYL
VGLDKEYTATIRLGVATDTDDADGTPISEADASGVTDAAVAAGIAALTGELEQVPSSYSA
IKVDGRRAYDLARAGEEVTLAARRVVIRSFELLATRRAGTAVELDVRVECSSGTYIRSLA
RDLGAGLGVGGHLTALRRTRVGPFRIDDAVTLPDPRHDPDAAAALDADAVLRDPADVASA
LFPVVRLDADATRDLAHGKRVELDAPDAETAAALTPEGRLAALVALRGGRARVLLGLPTS
EVLP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgacgagcggtgtgctgctcgtcgacaagccgcagggggtcacgagccacgacgtcgtc
gcgcgcgcccggcgcatcctcggcacgcgcaaggtcggccacgcgggaaccctcgatccg
atggcgacggggctgctgctgctcggcgtcgacagcgcgacccggctgctcacctacctc
gtgggcctcgacaaggagtacaccgcgaccatccggctcggcgtcgcgaccgacaccgac
gacgccgacggcaccccgatctccgaggccgacgcctccggcgtgacggatgcggcggtc
gccgccgggatcgccgcgctcacgggcgagctcgagcaggtgccgagcagctacagcgcc
atcaaggtcgacgggcgtcgcgcctacgacctcgcgcgtgcgggggaggaggtgacgctc
gcggcccggcgggtcgtcatccgcagcttcgagctgctcgccacccgccgtgcgggcacg
gccgtcgagctcgacgtgcgcgtcgagtgcagttcgggcacctacatccgctccctcgcc
cgcgacctgggcgccgggctcggcgtgggcgggcacctcacggcgctgcggcgcacgcgc
gtgggcccgttccgcatcgacgacgcggtcacgctgcccgacccgcgacacgatcccgac
gcggcggcggccctcgacgcggatgccgtgctgcgcgacccggccgacgtcgcctcggcg
ctgttccccgtcgtccgcctcgacgccgacgcgacgcgcgacctcgcccacggcaagcgc
gtcgagctcgacgcccccgacgccgagaccgcagccgcgctcacgccggagggacggctc
gcggcgctcgtcgccctgcgcggcggacgcgcgcgcgtgctgctcgggctgccgacctcg
gaggtgctgccatga
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