Protaetiibacter intestinalis: D7I47_12915
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Entry
D7I47_12915 CDS
T05661
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lyd
Protaetiibacter intestinalis
Pathway
lyd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D7I47_12915 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyd03400
]
D7I47_12915 (uvrA)
DNA repair and recombination proteins [BR:
lyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7I47_12915 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D7I47_12915 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
AAA_25
APS_kinase
DnaJ_CXXCXGXG
NACHT
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
AYF99068
UniProt:
A0A387BBK1
LinkDB
All DBs
Position
complement(2731159..2734062)
Genome browser
AA seq
967 aa
AA seq
DB search
MSITPVSGSQKLSVRGARVHNLKDVDLEIPRDALVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIYDYMRLLW
ARIGEPHCPVCGERIQRQTVQQIADQLMELPTGTRYQVLAPVVSQKKGEFVDLFKELSAS
GYSRAIVDGELVQLAEPPALKKQYKHDIAVVIDRLVASDELLTRVTDSVETALGLAGGVL
EIDFVDEEPTAKTRRRSFSEKLSCPNGHPIQLTEIEPRTFSFNAPFGACPECSGLGTKMA
VDTDLVIGDPELSLNEGVILPWNQGGKGLYSYFQRLLQGLARDLDFSLDTPWGELPDEVR
AAILQGNDFEVVVQWRNRFGRTMKYSTGFEGVMPYIERKYHEAESDWSQQRYGEYLREVP
CPVCAGKRLKPEVLAVRVAGESISDVAELSLVTAYEFMQRLELTEREARIAAQVLREIRL
RLEFLLEVGLGYLTMARAAATLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNR
RLIDTLVKLKSLGNTLIVVEHDEDTIRTADWIVDIGPGAGEHGGRVVHSGGYEALLDNHA
SVTGDYLAGRRAIAMPAKRRPIDKKRQLTVEGAQANNLQNVTVSFPLGAFVAVTGVSGSG
KSSLVNDILYKVLANQLNGARQVPGKHKRVTGLEHLDKVVHVDQAPIGRTPRSNPATYTG
VFDRIRTLFSETIEAKARGYQPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVVCEVC
HGARYNRDTLQVHYKGKNIAEVLDMPIAEAAEFFEPITAIHRYLKTLVDVGLGYVRLGQS
ATTLSGGEAQRVKLATELQKRSNGRSIYVLDEPTTGLHFEDVRKLLEVLNGLVDKGNSVI
VIEHNLDVIKSADWIIDLGPEGGSGGGQVIATGTPEQVARNAASHTGRFLAELLESEAAG
RGRRKAG
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatcacccctgtctccgggagccagaagctcagcgtccgaggcgcacgcgtccac
aatctgaaggacgtcgacctcgagatccctcgggatgcgctcgtcgtcttcacggggctg
tcggggtccggcaagtcgagcctcgcgttcgacacgatcttcgccgagggccagcgccgc
tacgtcgagtcgctgtccgcctacgcccgccagttcctcgggcaggtggaccgccccgac
gtcgacttcatcgagggcctgagcccggccgtctcgatcgaccagaagtcgaccaaccgc
aacccgcgctccacggtcggcacgatcaccgagatctacgactacatgcgtctgctgtgg
gcgcgcatcggcgagccgcactgcccggtctgcggcgagaggatccagcgccagacggtg
cagcagatcgccgaccagctcatggagctgccgaccggcacccgctatcaggtgctggcg
cccgtcgtctcgcagaagaagggcgagttcgtcgacctcttcaaggagctctcggcatcc
ggctactcccgggcgatcgtcgacggcgagctcgtgcagctggccgagccccccgcgctc
aagaagcagtacaagcacgacatcgccgtcgtgatcgaccggctcgtcgcctccgacgag
ctgctcacgcgcgtcaccgactccgtcgagaccgcgctcggcctcgcgggcggggtactc
gagatcgacttcgtcgacgaggagcccaccgcgaagacccgccgccgctcgttcagcgag
aagctgtcgtgcccgaacggccaccccatccagctcaccgagatcgagccgcgcaccttc
tcgttcaacgcgccgttcggcgcctgccccgagtgctcgggcctcggcacgaagatggcg
gtcgacacggatctcgtgatcggcgacccggagctcagcctcaacgagggcgtcatcctc
ccctggaaccagggcggcaagggtctctacagctacttccagcgactgctgcaggggctc
gcgcgcgacctcgacttctcgctcgacaccccgtggggcgaactgccggacgaggtgcgc
gcggcgatcctgcagggcaacgacttcgaggtcgtcgtgcagtggcgcaaccgcttcggc
cgcacgatgaagtactcgacgggcttcgagggcgtcatgccctacatcgagcgcaagtac
cacgaggccgagtccgactggtcgcagcagcgctacggcgagtacctgcgcgaggtgccg
tgcccggtctgcgcgggcaagcggctgaagcccgaggtgctcgcggtgcgcgtcgcgggg
gagagcatctcggatgtcgccgagctcagcctggtgaccgcgtacgagttcatgcagcgg
ctcgagctcaccgagcgcgaggcgcggatcgccgcgcaggtgctgcgcgagatccgtctg
cggctcgagttcctgctcgaggtcggtctcggatacctgacgatggcgcgcgcggcggcg
acgctctcgggcggcgaggcccagcgcatccgcctcgcgacccagatcggctcggggctc
acgggcgtgctctacgtgctcgacgagccctcgatcggcctgcatcagcgcgacaaccgc
cgactgatcgacacgctcgtgaagctcaagagcctcggcaacacgctcatcgtcgtcgag
cacgacgaggacaccatccgcaccgccgactggatcgtcgacatcggcccgggcgcggga
gagcacggtggccgcgtggtgcactcgggcggctacgaggcgctgctcgacaaccacgcc
tccgtcacgggggactacctggcggggcgccgggcgatcgcgatgcccgcgaagcggcgc
ccgatcgacaagaagcggcagctgacggtggagggcgctcaggccaacaacctgcagaac
gtgaccgtgagcttcccgctcggcgcctttgtcgccgtcacgggcgtctccggctcgggc
aagtcgagcctcgtcaacgacatcctctacaaggtgctcgccaaccagctgaacggcgcc
cgtcaggtgcccggcaagcacaagcgcgtgacggggctcgagcacctcgacaaggtcgtg
cacgtggatcaggcccccatcggccgcaccccgcgctcgaacccggcgacctacacgggc
gtcttcgaccgcatccgcaccctgttctcggagacgatcgaggcgaaggcgcgcggctat
cagcccggccggttcagcttcaacgtcaagggcggacgctgtgagaactgctcgggtgac
ggcaccatcaagatcgagatgaacttcctgcccgacgtgtacgtcgtgtgcgaggtgtgc
cacggcgcgcgctacaaccgcgacaccctgcaggtgcactacaagggcaagaacatcgcc
gaggtgctcgacatgccgatcgccgaggcggccgagttcttcgagccgatcacggccatc
catcgctacctcaagaccctcgtggatgtcgggctcggctacgtgcgcctcggccagagc
gcgacgaccctctccggcggcgaggcgcagcgcgtgaagctcgcgaccgagctgcagaag
cgctccaacggccgctcgatctacgtgctcgacgaaccgaccacgggcctgcacttcgaa
gacgtgcggaagctgctcgaggtgctgaacgggctcgtcgacaagggcaactcggtcatc
gtgatcgagcacaacctcgacgtcatcaagagcgccgactggatcatcgacctcggtccc
gagggcggatcgggcggtggccaggtgatcgccaccggcacgccagagcaggtcgcgcgg
aacgcggcgagccacaccgggcgcttcctcgcggagctcctcgagtccgaggcggccggg
cggggacgccggaaggcgggctga
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