KEGG   Protaetiibacter intestinalis: D7I47_12915
Entry
D7I47_12915       CDS       T05661                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
lyd  Protaetiibacter intestinalis
Pathway
lyd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lyd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    D7I47_12915 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lyd03400]
    D7I47_12915 (uvrA)
DNA repair and recombination proteins [BR:lyd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     D7I47_12915 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      D7I47_12915 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 nSTAND1 AAA_29 AAA_16 RsgA_GTPase AAA_25 APS_kinase DnaJ_CXXCXGXG NACHT BCA_ABC_TP_C
Other DBs
NCBI-ProteinID: AYF99068
UniProt: A0A387BBK1
LinkDB
Position
complement(2731159..2734062)
AA seq 967 aa
MSITPVSGSQKLSVRGARVHNLKDVDLEIPRDALVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIYDYMRLLW
ARIGEPHCPVCGERIQRQTVQQIADQLMELPTGTRYQVLAPVVSQKKGEFVDLFKELSAS
GYSRAIVDGELVQLAEPPALKKQYKHDIAVVIDRLVASDELLTRVTDSVETALGLAGGVL
EIDFVDEEPTAKTRRRSFSEKLSCPNGHPIQLTEIEPRTFSFNAPFGACPECSGLGTKMA
VDTDLVIGDPELSLNEGVILPWNQGGKGLYSYFQRLLQGLARDLDFSLDTPWGELPDEVR
AAILQGNDFEVVVQWRNRFGRTMKYSTGFEGVMPYIERKYHEAESDWSQQRYGEYLREVP
CPVCAGKRLKPEVLAVRVAGESISDVAELSLVTAYEFMQRLELTEREARIAAQVLREIRL
RLEFLLEVGLGYLTMARAAATLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNR
RLIDTLVKLKSLGNTLIVVEHDEDTIRTADWIVDIGPGAGEHGGRVVHSGGYEALLDNHA
SVTGDYLAGRRAIAMPAKRRPIDKKRQLTVEGAQANNLQNVTVSFPLGAFVAVTGVSGSG
KSSLVNDILYKVLANQLNGARQVPGKHKRVTGLEHLDKVVHVDQAPIGRTPRSNPATYTG
VFDRIRTLFSETIEAKARGYQPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVVCEVC
HGARYNRDTLQVHYKGKNIAEVLDMPIAEAAEFFEPITAIHRYLKTLVDVGLGYVRLGQS
ATTLSGGEAQRVKLATELQKRSNGRSIYVLDEPTTGLHFEDVRKLLEVLNGLVDKGNSVI
VIEHNLDVIKSADWIIDLGPEGGSGGGQVIATGTPEQVARNAASHTGRFLAELLESEAAG
RGRRKAG
NT seq 2904 nt   +upstreamnt  +downstreamnt
gtgtcgatcacccctgtctccgggagccagaagctcagcgtccgaggcgcacgcgtccac
aatctgaaggacgtcgacctcgagatccctcgggatgcgctcgtcgtcttcacggggctg
tcggggtccggcaagtcgagcctcgcgttcgacacgatcttcgccgagggccagcgccgc
tacgtcgagtcgctgtccgcctacgcccgccagttcctcgggcaggtggaccgccccgac
gtcgacttcatcgagggcctgagcccggccgtctcgatcgaccagaagtcgaccaaccgc
aacccgcgctccacggtcggcacgatcaccgagatctacgactacatgcgtctgctgtgg
gcgcgcatcggcgagccgcactgcccggtctgcggcgagaggatccagcgccagacggtg
cagcagatcgccgaccagctcatggagctgccgaccggcacccgctatcaggtgctggcg
cccgtcgtctcgcagaagaagggcgagttcgtcgacctcttcaaggagctctcggcatcc
ggctactcccgggcgatcgtcgacggcgagctcgtgcagctggccgagccccccgcgctc
aagaagcagtacaagcacgacatcgccgtcgtgatcgaccggctcgtcgcctccgacgag
ctgctcacgcgcgtcaccgactccgtcgagaccgcgctcggcctcgcgggcggggtactc
gagatcgacttcgtcgacgaggagcccaccgcgaagacccgccgccgctcgttcagcgag
aagctgtcgtgcccgaacggccaccccatccagctcaccgagatcgagccgcgcaccttc
tcgttcaacgcgccgttcggcgcctgccccgagtgctcgggcctcggcacgaagatggcg
gtcgacacggatctcgtgatcggcgacccggagctcagcctcaacgagggcgtcatcctc
ccctggaaccagggcggcaagggtctctacagctacttccagcgactgctgcaggggctc
gcgcgcgacctcgacttctcgctcgacaccccgtggggcgaactgccggacgaggtgcgc
gcggcgatcctgcagggcaacgacttcgaggtcgtcgtgcagtggcgcaaccgcttcggc
cgcacgatgaagtactcgacgggcttcgagggcgtcatgccctacatcgagcgcaagtac
cacgaggccgagtccgactggtcgcagcagcgctacggcgagtacctgcgcgaggtgccg
tgcccggtctgcgcgggcaagcggctgaagcccgaggtgctcgcggtgcgcgtcgcgggg
gagagcatctcggatgtcgccgagctcagcctggtgaccgcgtacgagttcatgcagcgg
ctcgagctcaccgagcgcgaggcgcggatcgccgcgcaggtgctgcgcgagatccgtctg
cggctcgagttcctgctcgaggtcggtctcggatacctgacgatggcgcgcgcggcggcg
acgctctcgggcggcgaggcccagcgcatccgcctcgcgacccagatcggctcggggctc
acgggcgtgctctacgtgctcgacgagccctcgatcggcctgcatcagcgcgacaaccgc
cgactgatcgacacgctcgtgaagctcaagagcctcggcaacacgctcatcgtcgtcgag
cacgacgaggacaccatccgcaccgccgactggatcgtcgacatcggcccgggcgcggga
gagcacggtggccgcgtggtgcactcgggcggctacgaggcgctgctcgacaaccacgcc
tccgtcacgggggactacctggcggggcgccgggcgatcgcgatgcccgcgaagcggcgc
ccgatcgacaagaagcggcagctgacggtggagggcgctcaggccaacaacctgcagaac
gtgaccgtgagcttcccgctcggcgcctttgtcgccgtcacgggcgtctccggctcgggc
aagtcgagcctcgtcaacgacatcctctacaaggtgctcgccaaccagctgaacggcgcc
cgtcaggtgcccggcaagcacaagcgcgtgacggggctcgagcacctcgacaaggtcgtg
cacgtggatcaggcccccatcggccgcaccccgcgctcgaacccggcgacctacacgggc
gtcttcgaccgcatccgcaccctgttctcggagacgatcgaggcgaaggcgcgcggctat
cagcccggccggttcagcttcaacgtcaagggcggacgctgtgagaactgctcgggtgac
ggcaccatcaagatcgagatgaacttcctgcccgacgtgtacgtcgtgtgcgaggtgtgc
cacggcgcgcgctacaaccgcgacaccctgcaggtgcactacaagggcaagaacatcgcc
gaggtgctcgacatgccgatcgccgaggcggccgagttcttcgagccgatcacggccatc
catcgctacctcaagaccctcgtggatgtcgggctcggctacgtgcgcctcggccagagc
gcgacgaccctctccggcggcgaggcgcagcgcgtgaagctcgcgaccgagctgcagaag
cgctccaacggccgctcgatctacgtgctcgacgaaccgaccacgggcctgcacttcgaa
gacgtgcggaagctgctcgaggtgctgaacgggctcgtcgacaagggcaactcggtcatc
gtgatcgagcacaacctcgacgtcatcaagagcgccgactggatcatcgacctcggtccc
gagggcggatcgggcggtggccaggtgatcgccaccggcacgccagagcaggtcgcgcgg
aacgcggcgagccacaccgggcgcttcctcgcggagctcctcgagtccgaggcggccggg
cggggacgccggaaggcgggctga

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