Protaetiibacter intestinalis: D7I47_12960
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Entry
D7I47_12960 CDS
T05661
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lyd
Protaetiibacter intestinalis
Pathway
lyd03030
DNA replication
lyd03410
Base excision repair
lyd03420
Nucleotide excision repair
lyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D7I47_12960 (polA)
03410 Base excision repair
D7I47_12960 (polA)
03420 Nucleotide excision repair
D7I47_12960 (polA)
03440 Homologous recombination
D7I47_12960 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyd03032
]
D7I47_12960 (polA)
03400 DNA repair and recombination proteins [BR:
lyd03400
]
D7I47_12960 (polA)
Enzymes [BR:
lyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D7I47_12960 (polA)
DNA replication proteins [BR:
lyd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D7I47_12960 (polA)
DNA repair and recombination proteins [BR:
lyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D7I47_12960 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7I47_12960 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DUF2492
Motif
Other DBs
NCBI-ProteinID:
AYF99076
UniProt:
A0A387BDF9
LinkDB
All DBs
Position
complement(2742907..2745573)
Genome browser
AA seq
888 aa
AA seq
DB search
MPEEKPTLLLIDGHSLAFRAFYALPVDSFVTRDGQHTNAIHGFISMLLNLLQQQKPTHLA
VAFDISRYSFRTREYAEYKGTRGETPPEFVGQVPLLEEALHAMNIRTLSKEDFEADDILA
TLATRGAAEGYRVLVVSGDRDTIQLVDDDVTLLYPNVRGVSELKTYDTDAVIERYGIRPE
QYPEIAALVGETSDNLPGVDKVGEKTAVKWIQQYGTVEELLAHADAITGVVGQNLRDQQD
RVVRNRRLNRLVRDVELPYGPADLEREAIDPTAVRAVFDRLQFRTLLDRVFKIEGAAADA
GLVDAEAGESTAISAPVVRTMIDEELAKWLQTQSKDGTLPLGLRIATVGGQVEGFGIASL
TESAWVPWAPGRPDYTALEQWLASDAPKYLHDAKRQLKTLHSAGLELAGVAGDTALSAWL
LRPGNKADSLGGLVYYYLGETLPEPDPSQLVPETEALNPATEAWYLVRLQAELDARLDPG
SLSVQHDIEVPLVPVLARMELQGITVSADVLGELNSRLGTQAAEIAQRAYAEIGREVNLG
SPKQLQEVLFDQLGMPKTRSNKTGYSTDAQALADLQEQHPHPFLELLLQHRDATKIRQIV
ETLQTAIGQDARIHTTYEQTGSATGRISSNDPNLQNIPVKTEVGREVRSAFLAGEGFETL
LTADYSQIEMRIMAHLSEDEGLIEAFRSGEDLHRFVGARIFGVAPADVTPTMRTKVKAMS
YGLAYGLSAFGLSKQLRIEVAEARELMADYFARFGAVREYLRGVVEQARVDGYTTTIFGR
RRPFSDLGSTNRVLRENAERQALNSPIQGSAADIIKRAMLTIDAEIRAAGLASRMLLQVH
DELVFEVAPGEREALTGIVTAGMAGAAELSVPLDVQLGTGPNWDAAAH
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaagaaaagcctacgctcctgctcatcgacggccactcgctggcgttccgtgcc
ttctacgcgttgccggtcgacagcttcgtgacccgcgacgggcagcacaccaacgccatc
cacgggttcatctcgatgctgctgaacctgctccagcagcagaagcccacccatctcgcg
gtcgcgttcgacatctcccgctactcgttccgcacgcgcgagtacgcggagtacaagggc
acccgcggcgagacccctcccgagttcgtcggccaggtgccgctgctcgaggaggcgctg
cacgccatgaacatccgcacgctctcgaaggaggacttcgaggcggacgacatcctcgcc
acgctcgccacccgcggcgctgccgagggctaccgcgtgctcgtcgtctcgggcgaccgc
gacaccatccagctcgtcgacgacgacgtcaccctgctctacccgaacgtgcgcggggtg
agcgagctcaagacctacgacaccgacgcggtgatcgagcgctacggcatccggcccgag
cagtaccccgagatcgccgcactcgtcggcgagacgagcgacaacctgccgggcgtcgac
aaggtcggcgagaagacggccgtcaagtggatccagcagtacggcacggtcgaggagctg
ctcgcgcacgccgacgccatcacgggcgtcgtcgggcagaacctgcgcgaccagcaggat
cgcgtcgtgcgcaaccggcggctcaaccgtctcgtgcgcgacgtcgagctgccctacggt
ccggccgacctcgagcgcgaggccatcgacccgacagccgtgcgtgcggtgttcgaccgg
ctgcagttccgcaccctgctcgaccgggtgttcaagatcgagggcgcggccgcggatgcg
gggctcgtcgacgcggaggcgggggagagcaccgcgatctcggcccccgtggtgcgcacg
atgatcgacgaggagctcgcgaagtggctgcagacgcagtcgaaggacggcacgttgccg
ctcgggttgcggatcgcgaccgtgggcggccaggtcgaaggcttcggcatcgcgagcctc
accgagagtgcgtgggtgccctgggccccgggccgtcccgactacacggcactcgagcag
tggctcgcctccgacgccccgaagtacctgcacgacgccaagcggcagctcaagacgctc
cactccgcgggcctcgagcttgcgggcgtggcgggcgacacggcactctcggcgtggctg
ctgcgccccggcaacaaggccgacagtctcggcgggctcgtctactactacctcggcgaa
accttgcccgagcccgacccgagccagctcgtgcccgagacggaggccctcaaccccgcc
accgaggcctggtacctcgtgcggttgcaggccgaactcgacgcacggctcgacccgggc
tccctctcggtgcagcacgacatcgaggtgccgctcgtgcccgtgctcgcgcgcatggag
ctgcagggcatcacggtctcggcggacgtgctcggcgagttgaactcgcgcctcggcacg
caggcggctgagatcgcccagcgggcctacgcggagatcggccgggaggtgaacctcggc
tcgccgaagcagctgcaggaggtgctcttcgaccagctcggcatgccgaagacccgctcc
aacaagaccggctactcgaccgacgcgcaggcgctggccgacctgcaggagcagcacccg
catccgttcctcgaactgctgctgcagcaccgcgacgccaccaagatccggcagatcgtc
gagaccctgcagaccgcgatcgggcaggacgcccgcatccacaccacctacgagcagacc
ggctcggccaccggccgcatctcctcgaacgacccgaacctgcagaacatcccggtgaag
accgaggtcggccgcgaggtgcggtcggcgttcctcgccggcgagggcttcgagacgctg
ctgacggccgactactcgcagatcgagatgcggatcatggcgcacctctccgaggacgag
gggctcatcgaggcgttccgctcgggggaggacctgcaccgcttcgtcggggcgcgcatc
ttcggcgtcgcccccgccgacgtcaccccgaccatgcgcacgaaggtcaaggcgatgtcc
tacggtctcgcctacggcctgtcggccttcgggctcagcaagcagctgcgcatcgaggtg
gcggaggcccgcgagctgatggccgactacttcgcccgcttcggcgcggtgcgcgagtac
ctgcgcggcgtcgtcgagcaggcccgcgtcgacgggtacaccacgacgatcttcggtcgg
cgccggcccttctccgacctgggctccaccaaccgggtgctgcgcgagaacgccgagcgg
caggcgctcaactcgcccatccagggctccgcggccgacatcatcaagcgcgcgatgctc
acgatcgacgcggagatccgcgccgccgggctcgcatcccggatgctcctgcaggtgcac
gacgaactcgtcttcgaggtcgcgccgggcgagcgggaggcgctcacgggcatcgtcacg
gccgggatggcgggggcggccgagctctcggtgccgctcgacgtgcagctggggactggc
ccgaactgggacgctgccgcacactag
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