Lysinibacillus sp. SGAir0095: C1N55_01725
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Entry
C1N55_01725 CDS
T06028
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg03420
Nucleotide excision repair
lyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1N55_01725
03430 Mismatch repair
C1N55_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyg03400
]
C1N55_01725
Enzymes [BR:
lyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N55_01725
DNA repair and recombination proteins [BR:
lyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N55_01725
MMR (mismatch excision repair)
Other MMR factors
C1N55_01725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
Viral_helicase1
AAA_30
DEAD
DUF2779
AAA_16
SLFN-g3_helicase
ResIII
NACHT
COMPASS-Shg1
AAA_11
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QCR34364
UniProt:
A0A4P8SK33
LinkDB
All DBs
Position
complement(348913..351165)
Genome browser
AA seq
750 aa
AA seq
DB search
MQHPDFQKEVERLEYTKQYMGELLEASQRDLKAVQDKIKESMANLEYIDSSDSYINILTN
SRFFELALNQKESLEAVKKKPYFARIHFQRTGELEELLYIGKTSLFHNETFEPIIVDWRS
PVANVYYDGRLGEISYPVRDEVYTGHLFSKRQYKIEDGELLSFQDVDLTTNDDLLQEALS
GKADVRLTEIVATIQKEQNEIIRAHLKQPILVQGAAGSGKTTIALHRISYFLYTMGEHFN
PEQLMILAPNKLFIEYIGDVLPELGVEQICQTTYAEYVQNATGVKLKLQNPNEQLETIVE
EGLDGLPSFNIPQIKGSLFYRELLDRYLKVHERNLASLFNEDVFIEKYRIMRGSHLKKLF
LEEFAYMPIEKRIERIKKVVQTEVKRKSKSVLSSLNTRYEDMIGKALSGLRDPDKRRETV
TKFIDERDERIPKITAEVKSTATSYMKRFEKAKIKKMYRKLLTDRQLLQELAPEWTFDQQ
EKFLQAHIKERWALEDLAALYYLHAKIKGIENQWKMRVVFIDEVQDYSLFQLAALQSGLD
TDMFTMVGDLAQGIHSYRSLTEWDSVLELFPRANYFTLQKSYRTTIEIMEVANKILMKMD
EDLPLVEPVVRHGHEPTFVQADSFESEKINELYQSIGQNGHKSIALICKTTAEATNYTKL
LNQAGVPAEMLSEESELGGAKLLVLPSHLAKGLEFDAVIIAAFDIPYFDTAIDRKLLYVA
LTRAMHELYLVGPGLDVFLLNEVSGTVKKE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
attcagcatcctgatttccaaaaagaagtggaacgattagaatataccaaacagtatatg
ggggagcttcttgaggcttcacaaagggatttaaaagctgttcaagacaagattaaagaa
tcgatggcgaaccttgaatatatcgattccagtgatagttacatcaatattttaacgaac
tctcgttttttcgaattagctttaaatcaaaaagaaagcttagaagccgttaagaaaaag
ccttactttgcccgcatccatttccaacgaacaggagagcttgaggagcttttgtatatt
ggcaaaacctctcttttccataacgaaacctttgagcccattattgtggattggcgttct
cccgtggcaaatgtttattacgacggtcgtctcggtgaaatttcttatccggtacgtgat
gaagtttatactgggcatttattctcgaaacggcaatataaaattgaagatggcgagctt
ttgagctttcaggatgttgatttaacaacaaatgatgatttgttgcaagaggcattatct
ggaaaggccgatgtgcgattgaccgaaatcgtcgcaaccattcaaaaagaacaaaatgaa
attatccgcgcccatttaaaacagccgattctcgtacaaggagctgccggaagtggaaaa
acaaccattgctcttcaccgaatctcatacttcctatatacgatgggcgaacattttaac
cctgaacaactaatgatcctagcaccaaacaaattatttatcgaatatattggtgacgta
ttgccagagctgggtgtggaacaaatttgccaaacaacctatgcagaatacgtccaaaat
gctacaggagtcaaattaaaattacaaaatcctaacgagcagcttgaaacaattgttgag
gaagggcttgatggacttccctctttcaacatccctcaaattaaaggatcactattttac
cgcgaactacttgaccgttatctcaaagttcacgagcgaaatctagcaagtttgtttaat
gaggatgtatttatagaaaaataccggattatgcgcggaagtcacttgaagaagctattt
ttggaagagtttgcctacatgcctattgaaaagcgtattgaacgcatcaaaaaagttgtg
caaacggaagtaaaacgaaaatccaagtctgttctttcgtcgttaaatactcgttacgaa
gatatgattgggaaagctttaagtggccttcgcgacccggacaaaagacgcgaaaccgtc
acaaaattcatagacgagcgtgatgaacgaattcctaaaatcacggcggaagtaaaatcg
acggccacttcatatatgaaacggttcgagaaagcaaaaatcaaaaaaatgtatcgaaag
cttttaaccgaccgacagctcctacaagaacttgcaccagagtggacttttgatcaacag
gagaaatttttgcaggcccatataaaagaaagatgggcattagaggatttagccgctctt
tattacttgcatgcaaaaatcaaaggcatcgagaatcaatggaagatgcgagtagtcttt
atcgacgaagttcaggattatagcttattccaattagccgccttacaaagtgggcttgat
actgacatgtttacaatggttggagatttagcacagggaattcatagttatcgttctttg
acggaatgggattctgtacttgagctgttccctcgcgcaaattactttactttgcaaaaa
agctatcgaacgacaattgaaataatggaagtagctaataaaattctcatgaaaatggat
gaagatttgccattagttgaaccggttgttcgacacggccatgaacctacctttgtgcag
gctgacagctttgaatcagagaaaatcaacgaattataccagtctattggtcaaaatggt
cataaatcgattgcacttatttgtaaaacaacagctgaagccacaaattatacgaagcta
ttaaaccaggcaggcgttcctgctgaaatgttgagtgaagaatcagagttaggcggtgca
aagcttctcgttctcccaagtcacctggcaaaaggacttgagtttgatgcagtcatcatc
gcagcatttgacatcccttactttgatactgccattgaccgaaagcttctatatgttgcc
ttaactcgcgccatgcacgaattgtatttagttggaccagggttagacgtctttttactt
aacgaagtatctggaacagtaaaaaaagagtaa
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