Lysinibacillus sp. SGAir0095: C1N55_04155
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Entry
C1N55_04155 CDS
T06028
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C1N55_04155 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyg03021
]
C1N55_04155 (rpoE)
03400 DNA repair and recombination proteins [BR:
lyg03400
]
C1N55_04155 (rpoE)
Transcription machinery [BR:
lyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C1N55_04155 (rpoE)
DNA repair and recombination proteins [BR:
lyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C1N55_04155 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
NTP_transferase
ColG_sub
Motif
Other DBs
NCBI-ProteinID:
QCR31401
UniProt:
A0A4P8S095
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All DBs
Position
815349..815939
Genome browser
AA seq
196 aa
AA seq
DB search
MHELDIREMTKEQLAEESLIDLAYAMLEERKSPIAFPELLKEIQNLNGLSDAEIQDRLVQ
FYTDMNIDGRFLLNHENGWGLREWYKVETIEEETAPTVKARKRKSKASADDEEDLIVDED
DLVFEEDFDEFVDEEIDEDEDDDEDIDFVEEEIDSIDEVDADIDDDLIEEEDGFIIDDDE
EAEDEDEEELDEDVEK
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgagttggatattcgtgaaatgacaaaagaacaattagcagaagaatcgttaatt
gacttagcctatgcaatgttagaagagagaaaatcaccaattgcattcccggaactttta
aaagaaattcaaaatttaaatggtttatctgatgcagaaatccaagatagactagtacaa
ttttatacagatatgaatatcgatggacgattcctgttaaaccatgaaaatggatgggga
cttcgtgaatggtataaagttgaaacaattgaagaagaaacagcaccaactgttaaagcg
cgcaaacgtaaatcaaaagcatctgctgacgatgaagaagatttaatcgttgatgaagat
gatttagtatttgaagaagacttcgacgaatttgttgatgaagaaattgatgaggacgag
gacgatgacgaagatattgacttcgttgaagaagaaattgacagcatcgatgaagtagac
gcagacattgacgatgacctgatcgaagaagaagacggtttcatcattgatgacgacgaa
gaagcagaagatgaagacgaagaagaattggatgaagatgtagaaaaataa
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