Lysinibacillus sp. SGAir0095: C1N55_04690
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Entry
C1N55_04690 CDS
T06028
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg00521
Streptomycin biosynthesis
lyg00523
Polyketide sugar unit biosynthesis
lyg00525
Acarbose and validamycin biosynthesis
lyg00541
Biosynthesis of various nucleotide sugars
lyg01055
Biosynthesis of vancomycin group antibiotics
lyg01100
Metabolic pathways
lyg01110
Biosynthesis of secondary metabolites
lyg01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C1N55_04690 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C1N55_04690 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C1N55_04690 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C1N55_04690 (rfbB)
00525 Acarbose and validamycin biosynthesis
C1N55_04690 (rfbB)
Enzymes [BR:
lyg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C1N55_04690 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
QCR31506
UniProt:
A0A4P8S4D7
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All DBs
Position
939785..940819
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AA seq
344 aa
AA seq
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MNLLVTGGAGFIGSNFIIYMLNKFPKYKIVNLDLLTYAGNLENLKAVEKHPNYEFVKGNI
CNRELVEYLFSKYEFQGVIHFAAESHVDNSIKNPSAFVETNVLGTFTVLDVARNTWLDKQ
NEVKEKYKNARFHHISTDEVYGTLGEGGYFTEDSPYAPNSPYSASKAASDMLVRSYYHTY
GLNVVTTNCSNNFGPNQHDEKLIPTIIRKALAFESIPIYGEGLNVRDWLFVEDHCRAIDL
VFHDGKSGETYLIGADNERTNLDLVNEICEILDEKLQLKLKEKEMNSFKQLITFVDDRPG
HDFRYAIDFSKINLELGFTVSSSKENLSKLIGQIITRTYSLRLN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgttagttactggtggggccggttttatcggttcaaacttcattatatatatg
ctaaataaatttccgaaatataagatagttaatctagatttacttacttatgctgggaat
ttagaaaatttaaaggctgtcgaaaaacatcctaattatgagtttgtaaaaggaaatatt
tgtaatagggaattagttgaatacttattttcgaaatatgaattccaaggagtaattcat
tttgcagcagaatcacatgtagataattctattaaaaatcccagtgcatttgttgaaacc
aatgtattaggaacatttaccgtacttgatgttgctcgaaatacttggttagataagcaa
aatgaagtgaaagaaaaatacaaaaatgctagatttcatcatatttcaaccgatgaagta
tatgggactctaggtgaaggcggatactttactgaggattcaccatatgcaccaaatagt
ccatattcagcaagtaaagctgcttcggatatgttagtaagaagttattatcatacctat
ggattaaatgttgttacaactaattgttccaataatttcggaccaaaccaacatgatgaa
aaattgattccgactattataagaaaggcattagcctttgaatcgattcccatttatgga
gaagggttaaatgttagggattggttatttgtagaggaccattgtagagcaattgattta
gtttttcatgatggaaaatcaggtgagacctatttgataggtgcggataatgagagaact
aatttagatttagttaatgaaatatgtgaaatattagatgaaaagttacaacttaaatta
aaagaaaaagagatgaattctttcaagcaactaattactttcgttgacgatagaccagga
catgattttagatatgctattgatttttcaaaaataaatctagaattaggttttactgta
tcaagttcgaaagaaaatttaagtaaattaattggacaaattattacaaggacatatagc
ttacgtttaaattag
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