Lysinibacillus sp. SGAir0095: C1N55_05010
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Entry
C1N55_05010 CDS
T06028
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lyg
Lysinibacillus sp. SGAir0095
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyg03400
]
C1N55_05010 (addA)
Enzymes [BR:
lyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N55_05010 (addA)
DNA repair and recombination proteins [BR:
lyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C1N55_05010 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
Tai4
Motif
Other DBs
NCBI-ProteinID:
QCR31565
LinkDB
All DBs
Position
1006983..1010708
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AA seq
1241 aa
AA seq
DB search
MGLSIPEKQPDVTWTDEQWKAIWATGQDTLVSAAAGSGKTAVLINRMIEKVISSDNPIDV
DELLVVTFTNASAAEMRHRMAEALEKEIAKDPRNQHLRRQLSLVNKAQISTLHSFCLAIV
RQYAYLIEIDPGFRIANEGESALLRDDVLAQCLEEAYDQEDEAKVNAVYRLVDSFTSDRD
DQAIETLINKLYDTSRVHPEPTKWLHSLSLQYNLPENMTIDELPFIEPLKNSIKFSLEEA
LAHIEEMRQYSLKPDGPAPYGETAKLDTALIEEARRIITHRTWQEAYDFFTTLKWPGIAR
IPKDSCDPELKEMGQKKREQAKKIVNQLKESFFQRKPHRLLEEMRLMAPIIETLVELTES
FSEKFKEAKLQRGLVDFSDLEHYALEILTVEEDGKLQPSPVALDFKEKFKEVLVDEYQDT
NMLQETILQLVKSGSEIDGNLFMVGDVKQSIYRFRLAEPMLFLNKYNLFEQDPISNGLKI
DLNANFRSRKEVLHGTNYVFEQIMGETVGEIHYDEKAGLKPGAPYNEADMPIELAIIYEE
DPDDAIEESTEETAADFQMEEEILKSQAEARFIIKRIRELMDSGATVYDAKQKDPAKRVR
PMQYSDIVILMRSMTWSNDLVEEFKSAGIPLYAESSKGYFEALEVMVMLNVLKIVDNPYQ
DIPLASVLRAPFIGCTENELAKIRLVNRKAPYYDAVKQFVEEEQSGLNTDTAVKLQRFLT
QLETWRNSARRGSLSDLIWKIYLDTNYYEMVGAMTNGKQRQANLRTLHDRALMYEKTSFR
GLFRFLRFIDRMRSRGDDLGVAKSIGEKDDVVRLVTIHSSKGLEYPVVFLAGLGRSFNQM
DFNNAYLFDQQFGLAVKAIDPDDRIMYTSLPFLAMKEKKILELKAEEMRILYVAMTRAKE
RLILVGTVKDWEKVSSKWCEIQHLPTDAMLPEYLRARAKNYLDWVGPAVARHESFKAFSN
EEYKPIDDASKWVISPISNTFFMNALYSQDEGELEEPGVQEVDEVLLSKLQKQYTTPYAH
LSSVTKKSKTSVSEIKRIESLQREEEPETQIMQTKTVSAKKRPLFLQEKKLSATEIGTVV
HTVMQHVPKVGFTKLDEVVAYLKVLVERKLLTEEEIQVVNPEKVYKFFLSNIGQRFTGAK
QLYREIPFTLSIEDEEGDSQIIQGILDCLFQDEEGKWVLLDYKTDKILPAFTEEPSLTNE
MKKRYGVQLRIYTEAIETILQVKVDEKVLYLYNAEKEIRLD
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgggactatcaattcctgaaaaacaacctgacgtaacctggacggatgaacaatggaaa
gcgatttgggctactggacaggatacccttgtttcagcagctgctggttcaggtaaaact
gcagtgctcattaatcgaatgattgaaaaagtaatttccagtgataatccgattgatgtg
gatgagctgctagttgtaacctttacaaacgcatcagcagcagaaatgcgtcatcgtatg
gcagaggctttagaaaaagaaattgccaaagaccctcgtaatcagcatctgcgtagacag
cttagcttagtaaataaagcacaaatatctaccttgcactcattttgtttagctatagtt
cgccaatatgcctatctaatcgaaatagatccaggatttcgaattgcgaatgaaggagaa
tcagcattacttcgcgatgatgtcttagcgcaatgtttggaagaagcctatgatcaagaa
gatgaagcaaaagtaaatgcggtttatcgattagtggatagttttacatctgaccgtgat
gaccaggctatcgaaacattgatcaataaattgtatgacacgtcacgagttcatcctgaa
ccaacaaaatggttacattcattatctttgcaatataacttaccggaaaatatgacgatc
gatgagcttccttttattgaaccgttaaaaaattccattaaatttagtctagaagaagca
ctggcccatatcgaagaaatgcgtcaatattctttaaaaccggatggaccagccccttac
ggagaaacagcaaagttggatacagcgctaattgaggaagcaagacgtattattacccat
agaacttggcaggaagcttatgattttttcactacgttaaaatggccaggaattgctaga
attccaaaggatagctgtgatcccgaactgaaggaaatggggcagaagaaaagagaacaa
gccaaaaagattgtaaatcaactaaaagaatcattctttcaacgtaaaccacaccggttg
ttagaggaaatgcggttgatggcaccgattatcgaaactttagtcgagttaacggaaagc
tttagtgagaaatttaaagaagccaagctacaaagaggattagttgatttttcggattta
gagcattatgctttagaaattttaacagtcgaggaggatgggaaactacaaccatccccg
gttgcattggatttcaaagaaaaattcaaagaagtgttagtcgatgaataccaggataca
aacatgctgcaggagacgattttacagcttgtcaaaagtggcagcgaaatcgatggaaac
ttatttatggtgggcgacgttaaacaatcaatttaccgtttccgtctggccgagccaatg
ctctttttaaataagtacaatttgtttgaacaagacccaatttcaaatggcttaaaaatt
gacttaaatgcaaacttccgtagtcggaaagaggttttacacgggacaaattatgtgttt
gagcaaataatgggtgagacagtaggggaaatccattatgatgaaaaggctggtcttaag
ccgggtgctccatataatgaagcggacatgccaattgaattagcaattatatacgaagaa
gaccccgatgatgctattgaagaatcaacggaagaaacggcagcagattttcaaatggaa
gaggaaattcttaagtctcaggcagaggcacgttttattattaaacgtatccgtgaatta
atggatagtggagccacggtttatgatgccaaacaaaaagacccagcaaaacgcgttcgt
cctatgcaatatagtgatattgtgattttaatgcgttccatgacttggtccaatgattta
gtggaagaatttaagtccgcgggaattcctttatatgcagaatcctcaaagggatacttt
gaagcacttgaagtcatggtaatgttgaatgtactaaagattgttgataatccataccag
gacattcctttagcttcagtattaagagcgccttttatcggctgtacagaaaacgaattg
gctaaaattcgtttggttaatcgtaaagcaccctattatgatgctgtaaaacaatttgtt
gaagaagagcaatctggtctaaatacggatacggctgtgaaacttcaaaggtttctaacc
cagcttgaaacgtggagaaattcagcacggagaggttctttatccgatttaatatggaag
atttatctagacacgaactattatgaaatggttggtgctatgacaaatgggaaacagcga
caagcgaatttaaggaccctgcatgatcgagccttgatgtacgagaaaacatctttccgc
ggacttttccgttttttacgctttatcgatcgtatgcgttctcgtggagatgatttaggg
gtggctaagtccattggagaaaaggatgatgtagtgcgtcttgtcacaattcattcatcg
aaaggacttgaatatcctgttgtgtttttagctgggttagggcgaagtttcaatcaaatg
gactttaataatgcctatttgtttgaccaacaatttggattagcagtaaaggcgattgat
ccagacgatcgtatcatgtacacgtcactgccatttcttgcgatgaaagaaaagaagata
ctcgagttaaaggcagaagaaatgcgtatattgtatgtggcaatgacaagggcgaaggag
cgattaatcctggtaggtactgtgaaggattgggagaaagtcagttcaaagtggtgtgag
attcaacaccttccaacggatgccatgctgccagaatatctacgtgcacgtgcaaagaat
tacttggattgggttggaccagcagttgccagacatgaaagttttaaagcatttagtaat
gaagagtataagccgatagacgacgcatccaaatgggttatttcacctatttcgaatact
ttctttatgaatgcattatattcacaggatgaaggtgaattggaagagccgggagtacaa
gaggttgatgaagtattgctaagtaaattacagaagcaatatactacgccatatgctcat
ttaagctctgtaaccaaaaaatcaaaaaccagtgtttctgagattaaacgaatcgaaagc
ttacaacgtgaggaagaacccgagacacaaataatgcaaacgaaaactgtttccgctaag
aaaaggccgctgtttttacaggagaaaaaattatcagcaacagaaattggtactgttgta
catactgtgatgcagcatgtaccaaaagtagggtttactaagcttgacgaagttgtcgct
tacttgaaagtgctggttgaaagaaaactgctaactgaagaggagatacaagttgtaaat
cctgagaaggtttataaattctttttaagtaatattggacagcgttttactggtgcaaaa
caattgtatcgggaaattccatttactttaagcattgaagatgaagagggagattcacaa
atcattcaggggatattagactgtttattccaagatgaagaaggcaaatgggttttgctc
gattataaaacagataaaattttacctgctttcacagaagaaccttctttaacaaatgaa
atgaaaaaacgctatggtgttcaattaagaatatatactgaggcaattgaaacgatcctg
caagtaaaagtcgatgagaaagtgttgtatttatataatgcagagaaagaaatcagacta
gattaa
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