Lysinibacillus sp. SGAir0095: C1N55_05970
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Entry
C1N55_05970 CDS
T06028
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C1N55_05970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyg03400
]
C1N55_05970
Enzymes [BR:
lyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N55_05970
DNA repair and recombination proteins [BR:
lyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1N55_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PIF1
SLFN-g3_helicase
nSTAND_NTPase5
DUF3638
UvrD-helicase
T2SSE
Zn_ribbon_PF0610
AAA_16
AAA_19
Zeta_toxin
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QCR31745
LinkDB
All DBs
Position
1209731..1212145
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AA seq
804 aa
AA seq
DB search
MITVAEVIVDVAAYPVDRPFDYLVPADMAQIIEMGSRVKVPFGPRNVLGFVVAIKNETDV
PLEKIKPVSEILDIEPVLTKEMLELAKWLKNETICYEIDALQVMLPSALRAKYEKMASLQ
SDIGLLPIELQNIFGTSRKANIKEFEKNNLLPELKQAIKNKLIVIENVVKQKGKVKEVRK
VQIIGDAQKLTEIHEHISNRAKKQKQIVEWMQFHLGEIMDPEIIYKETSSSSHVLNAVVE
LGAAAFVQEEMYRDPFLKDVQKTNFLSLTDEQSVALNQIMNAIDEQEPKTFLLQGVTGSG
KTEVYLQTIAKVLNDGKEAILLVPEISLTPQMTERFRSRFGELVAVMHSGLSVGEKYDEW
RKIHQGKVKVVVGARSAVFAPFENVGIIILDEEHESTYKQEDSPRYHARDVAIWRSKYHK
CPVILGSATPSLESFARAKKNVYTLLTLKERALKQSLPKVHIVDMRDELKKGNRSMFSQS
LVESIQVRLERKEQIVLFLNRRGYSSFVLCRDCGTVLQCENCDISLTYHRKNEKCKCHYC
GFEIHVPKNCPQCQSDHIRFFGTGTQKVEEELAKLFPGARVLRMDVDTTRAKGSHEQLLQ
AFGDGEADILLGTQMIAKGLDYPNITLVGVLSADTSLHLPDFRAAEKTFQLLTQVSGRAG
RHDKPGEVVVQTYTPEHYAIELSEAQNYDPFYEREMYMRHQAGYPPYYYLALIQVSHEDV
LMAADYAGKAVEWLRSQLSFNVSIIGPTAAGISRLQNRYRYQCLIKYKVEPDLIPTLLQL
IKIYRSDWIKKGINLTVDLDPNMI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgattaccgttgctgaagttatcgtggatgttgccgcatatcctgtcgatcgccctttt
gattatttagtgcctgctgacatggcacaaattatcgagatggggagtcgagttaaagta
ccatttggaccacgaaatgtactcggatttgttgtggctattaaaaacgaaaccgatgtc
ccattggaaaagattaaaccagtttcagaaattctggatattgaaccggttttaacaaag
gaaatgcttgagcttgcgaaatggttaaagaatgaaacgatttgctatgaaatagatgct
cttcaagtaatgcttccttctgccttaagagcaaaatatgaaaaaatggcaagcttgcaa
tcagatattgggcttttacctattgagcttcaaaatatttttggtacttcccgaaaggct
aatattaaagaatttgaaaaaaacaatttgctccccgagttaaaacaagctataaaaaac
aaattgatagtaatcgagaatgtcgttaaacaaaaagggaaagtaaaggaagttcgtaaa
gttcaaattattggagatgctcaaaaattaactgagattcatgaacacatttcaaatcgt
gccaagaaacaaaagcagattgtcgagtggatgcagtttcatcttggagaaataatggat
cccgaaatcatctataaagagacaagttcttcatcccatgttttaaacgcagtagttgaa
ctaggagccgcagcatttgttcaagaagagatgtatcgagatcctttcttaaaagatgtt
caaaaaacgaatttcctaagtttaacagatgaacaatcagttgcattaaatcaaattatg
aatgcaatcgatgaacaggaacctaaaacctttttgttacaaggggttacaggtagtggt
aaaacggaagtgtatttgcaaaccatcgccaaagttttgaatgatggtaaggaggcaatc
ttattagttcctgaaatctccttaacaccacaaatgactgaacgctttcgttctcgattt
ggtgaattggtagctgttatgcacagtggcttatctgttggtgaaaagtatgatgagtgg
cgaaaaattcatcaaggaaaagtaaaggtggttgttggggctcgatcagccgtgtttgca
ccctttgaaaacgtagggatcatcatcttggacgaagaacacgaatcaacctataagcaa
gaggattccccaaggtaccatgctcgagatgttgcaatttggcgaagtaagtatcataag
tgtccagtaatattaggaagtgcaaccccatcgttagaatcctttgcacgtgcaaagaaa
aatgtgtatacgttactaaccttaaaggaacgtgcattaaagcaatcattacctaaagta
catattgtcgatatgcgtgatgagttgaaaaaagggaatcgttcaatgttctcccaaagc
ctagtggaatccattcaagttcgtttggaaagaaaagaacagattgttctattcctaaac
cgacgcggctattcatcttttgtactttgtcgggattgcggaacagttttgcaatgcgaa
aattgtgatatctccttaacctatcaccgaaaaaatgaaaaatgtaaatgtcattattgt
ggctttgaaattcatgtgccaaaaaactgcccacaatgtcaaagtgaccatatccgtttt
tttggtacaggcacacaaaaagttgaggaagaattagctaaattatttccaggggctaga
gtactccgaatggatgttgataccacacgtgcaaaagggtcacatgagcagttattacaa
gcatttggtgatggagaagcagatattttgctaggtacacaaatgattgcaaaggggctt
gattacccaaacattacattggtaggcgtattaagtgcggatacatctcttcatttacct
gacttcagagcagctgaaaaaacattccagctactaacgcaagtaagtggacgagctggt
agacatgataagccaggagaagtagtcgtgcaaacttatactcccgaacactatgcaatc
gaattatcagaagcgcaaaactatgatccgttttatgaacgtgaaatgtatatgcgccac
caagcaggctacccaccctattattatttggcactaattcaagtatcccatgaggatgta
ttaatggcagcggattatgcgggtaaagcagtagagtggttacgttcgcagctttctttt
aacgtttcgataattggaccaactgctgccggtatcagtcgcctccaaaatagatatcgt
tatcaatgtttgataaaatacaaagtagagccagatttaatcccaaccttattgcaactg
attaagatttaccgttcagattggataaaaaaaggaattaatttgactgtagatttagat
ccaaacatgatttaa
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