Lysinibacillus sp. SGAir0095: C1N55_06180
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Entry
C1N55_06180 CDS
T06028
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lyg
Lysinibacillus sp. SGAir0095
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyg03032
]
C1N55_06180
03400 DNA repair and recombination proteins [BR:
lyg03400
]
C1N55_06180
Enzymes [BR:
lyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1N55_06180
DNA replication proteins [BR:
lyg03032
]
Prokaryotic type
DNA Topoisomerases
C1N55_06180
DNA repair and recombination proteins [BR:
lyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1N55_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
DUF2996
Toprim_2
Toprim_3
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QCR31787
UniProt:
A0A4P8S168
LinkDB
All DBs
Position
1253731..1255809
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASIGHVRDLPKSQTGIDTENNYEPKYITIRGK
GPVLQDLKSAAKKAKKIYLAADPDREGEAIAWHLAQALNIETTSDCRVVFNEITKDAILE
SFKNPRPINMDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRFIIDREE
EIKNFIPEEYWSIEANFDKGKKQFDAYYYGNGEEKVKLTNEEQVKAVLNGLKGDEFRVAN
VVKKERKRNAAPAFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDIGKKEGTVGLITYM
RTDSTRISDSAKTEANNYINEKYGKEYIVGEAKQAKKSANAQDAHEAIRPTSTMRTPDEL
KAVLSRDQLRLYRLIWERFIASQMAPAVLDTVTVDLVNGDVQFRANGSHVKFPGFMKLYI
EGTDDQTEETTKLLPEMEVGDTVKSLEIEPKQHFTQPPPRFTEARLVKELEERGIGRPST
YAPTLDVIQRRGYVQLDAKRFVPTELGEIVHQATLEFFPEIINIEFTAQMEQDLDAIEEG
MRKWVEVIDAFYKDFEPRVKYADEAMEKIEIKDEPAGEDCEKCGSPMVYKLGRYGKFMAC
SNFPECRNTKAIMKPIGVKCPSCETGEIVERKSKTKRLFYGCNTYPECDFVSWDKPISRP
CPKCSSLLVEKKIKKGVQIQCTKCDYEEAPSQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgatagtagaatcacccgcaaaagcaaaaacaattgaaagatac
ttagggaaaaaatataaagtaaaagcttccattggtcatgttagggacctaccaaaaagc
caaacgggtattgatacagaaaataactatgaacccaaatacattaccattcgtgggaaa
ggtccagtgctacaggacttaaaatcagcggcaaaaaaagcaaaaaaaatctatctcgca
gccgatcccgatcgcgaaggagaagcaattgcttggcatttagcacaagcattaaatatt
gaaacaacttcagattgccgtgtggtatttaatgaaattacaaaagatgcaattttagaa
tcctttaaaaatccacggcctatcaatatggatttagtggacgcacaacaagcaagacgt
attttggacagacttgtagggtataacattagtccaattctttggaaaaaagtaaaaaaa
ggactatcagcgggtcgtgttcaatccattgctctccgatttatcatcgatcgagaagaa
gagataaaaaactttattcccgaagaatattggtcaattgaagccaattttgataaaggg
aaaaagcaattcgatgcctattactatggcaatggtgaggaaaaagtaaagcttacaaac
gaagagcaagttaaagcggtattaaatggcttaaagggcgatgagttccgcgtagcaaat
gtagtcaaaaaagaacggaaacgtaatgcagccccagcatttacaacatcttctctgcaa
caagaagcagcccgaaaattaaatttccgtgcgaagaaaacgatgatgctagctcaacag
ctttatgaaggtattgatatcgggaaaaaagaaggtactgtcgggttaattacatatatg
cgtacagactcaacacgaatctcggacagtgcaaaaacagaagcaaacaattatatcaat
gaaaaatacggtaaagaatatattgtaggagaagcaaaacaagctaaaaaatctgcaaat
gctcaggatgcccacgaagcaatccgtcctactagtacgatgagaacgccggatgagcta
aaagccgttttaagtcgtgatcagctacgtctttaccgactaatttgggagcgttttatt
gcaagtcaaatggctcctgcggtattggatactgtgacggtcgatttagtaaatggggat
gttcaattccgtgccaatggatcccatgtgaagtttcctgggtttatgaagctttatatt
gaaggaacagatgaccaaacagaggaaacaacaaagcttcttccagaaatggaagtgggc
gatacggtgaagtccttggaaattgaaccaaaacagcacttcacacaaccgcctccacgt
ttcacagaagcgcgtcttgtaaaagagcttgaggaaagaggcatcggtcgtccttcaacg
tatgcgccaactttagacgttattcaaagacgtgggtatgttcaattagatgcaaaacga
tttgtaccaaccgagcttggagaaattgttcatcaagcaacattagagttcttcccggaa
atcatcaatattgagtttacagctcaaatggaacaggatttagatgccattgaggaaggt
atgagaaaatgggtagaagtcattgatgctttctacaaagattttgaaccacgcgtgaag
tacgctgatgaggcaatggagaaaattgagattaaagacgaaccggctggtgaagattgt
gaaaaatgtggttctcctatggtatacaagttaggtagatatggaaaattcatggcttgt
tcgaacttccctgaatgccgtaacacaaaagccattatgaaaccaatcggggtaaaatgt
ccgagctgtgaaacaggggaaatcgtcgaaagaaaaagtaaaacaaaacgtttattctat
ggatgcaacacttacccagagtgcgactttgtttcgtgggataagccaataagcagacct
tgtccaaaatgtagttctctattagttgagaagaaaatcaaaaaaggtgttcaaatacaa
tgtacaaaatgtgattatgaagaagcaccttctcaataa
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