Lysinibacillus sp. SGAir0095: C1N55_06365
Help
Entry
C1N55_06365 CDS
T06028
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg02020
Two-component system
lyg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C1N55_06365
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C1N55_06365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyg03021
]
C1N55_06365
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lyg02035
]
C1N55_06365
Transcription machinery [BR:
lyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C1N55_06365
Bacterial motility proteins [BR:
lyg02035
]
Flagellar system
Flagellar assembly proteins
Stator
C1N55_06365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DnaD_N
UPF0122
KaiA
Motif
Other DBs
NCBI-ProteinID:
QCR31822
LinkDB
All DBs
Position
1287465..1288235
Genome browser
AA seq
256 aa
AA seq
DB search
MVRQLQADNEQTLWNCWLNDRDPEAGNILIKKYQSLVSYHVQRIGASVPKNVSRDDLMSL
GMMGLFDALNKFDINRDLKFDTYASFRVRGAIIDGLRKEDWLPRSAREKSKKMEAQIEKL
EQQLMRSVTPDELAQYMDLSVEEVYQTVQEHFFSSVLSINEQQDQEESEGKAFVIRDDRT
RTPEQETVHMELIKDLSENIKNLSEKEQLVLSLFYTEELTLTEIGEMLNLSTSRISQIHS
KALFKLRKLLSNEMLS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggtacgacaacttcaagcagacaacgaacaaactctttggaattgctggctcaatgat
cgcgatccagaggcaggtaatatactaataaaaaaatatcaatcactagtatcctatcat
gttcaaagaataggtgcgagtgttcctaaaaatgtatcaagagatgatttaatgagttta
ggtatgatgggactctttgatgcattaaataagtttgacataaatcgagatttaaaattt
gatacatatgcttccttccgtgtgagaggtgctattatagacggattaagaaaagaagat
tggctacctcgctctgcacgtgaaaagtcaaagaagatggaagcacaaattgaaaaatta
gaacaacaacttatgcgtagtgtgacgccggatgagcttgctcaatatatggatttatca
gtagaggaagtatatcaaacagtacaggagcacttcttctccagtgttttatcgattaac
gaacagcaagatcaggaagagtcagaagggaaagcttttgtaattagagatgatcgtaca
agaacgcctgagcaagaaactgtccatatggaattgattaaagatctttccgaaaatatt
aaaaacttaagtgaaaaggaacagcttgtactaagtctgttctatacagaggaattgaca
ttaacggaaattggtgaaatgcttaatttatcaacatcaagaatatcacaaatccattca
aaagcattatttaaattaagaaagcttctttcaaatgaaatgttaagctag
DBGET
integrated database retrieval system
