Lysinibacillus sp. SGAir0095: C1N55_12280
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Entry
C1N55_12280 CDS
T06028
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1N55_12280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyg03400
]
C1N55_12280
Enzymes [BR:
lyg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
C1N55_12280
DNA repair and recombination proteins [BR:
lyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C1N55_12280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QCR32902
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All DBs
Position
complement(2487554..2488441)
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AA seq
295 aa
AA seq
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MLLGSHVSMSGKEMLLGSSKEAASYGSSTFMIYTGAPQNTRRKPIEELNIEAGLAHMKEN
GLSNIVVHAPYIINIANTTKPETFALGVEFLQKEIERTAAIGATQIVLHPGAHVGAGVEM
GIAKIIEGLNEVLSTNHPVQIALETMAGKGSEIGRSFEELAQIFDGVKNNDRLSVCFDTC
HIHDAGYDIINDFDGVLAKFDQLIGIDRIKVVHINDSKNVCGAGKDRHENIGFGHIGFEA
LKSIVHHEAFKDVPKILETPWVGTDAKNKKAPYKFEIEMLKSGDYKPAEIEALLV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgttgttaggttcacacgtttcgatgagtggaaaagaaatgcttctgggatcaagtaaa
gaggcagcttcctatggttcatcaacattcatgatttatacaggtgcaccccaaaatact
cgtcgtaagcctattgaagagttaaatattgaagctggactagcacatatgaaagaaaat
ggactttcaaatattgtggttcatgcaccttatattatcaatatcgctaataccacaaaa
cctgaaacttttgcattaggtgtagagttcctgcaaaaagaaatcgagcgtacagcagca
attggcgcaacacaaattgttctacaccctggagcccatgtgggtgcaggtgtggagatg
ggtattgcgaaaattattgaaggtttaaatgaggtattatctacaaatcatcctgttcaa
attgccttggaaaccatggcaggaaagggatccgagattggtagatcctttgaagaacta
gcccaaatttttgatggtgtaaaaaataatgatcgtttatctgtatgctttgatacttgt
catatacatgacgcaggttatgacattatcaacgattttgatggggtactagctaaattt
gatcaattgatagggattgaccgtattaaggttgttcatataaatgatagcaaaaatgtt
tgtggagcaggaaaagaccgtcatgaaaatattggatttggacatatcggatttgaagca
cttaaatccattgttcaccatgaagcgttcaaagatgtgcctaaaatccttgaaacacca
tgggttggaactgacgccaagaacaaaaaagcgccatataaatttgaaatagaaatgcta
aaaagtggcgactataaaccagcagaaatcgaagcattactagtttaa
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