Lysinibacillus sp. SGAir0095: C1N55_13985
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Entry
C1N55_13985 CDS
T06028
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg03030
DNA replication
lyg03410
Base excision repair
lyg03420
Nucleotide excision repair
lyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1N55_13985
03410 Base excision repair
C1N55_13985
03420 Nucleotide excision repair
C1N55_13985
03440 Homologous recombination
C1N55_13985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyg03032
]
C1N55_13985
03400 DNA repair and recombination proteins [BR:
lyg03400
]
C1N55_13985
Enzymes [BR:
lyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1N55_13985
DNA replication proteins [BR:
lyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C1N55_13985
DNA repair and recombination proteins [BR:
lyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C1N55_13985
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N55_13985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
DNA_pol_A_exo1
HHH_2
NYN_YacP
HHH
SWIRM-assoc_2
Motif
Other DBs
NCBI-ProteinID:
QCR33223
LinkDB
All DBs
Position
complement(2820731..2823358)
Genome browser
AA seq
875 aa
AA seq
DB search
MGKEKLLLLDGNSLAYRAFFALPLLANDSGIHTNAVYGFTTMLQKIVEEEKPTKMLVAFD
AGKTTFRHESYGEYKGGRQKTPPELSEQFPYIRKLIDAYQIKRYEKELYEADDIIGTLAK
QAENEQMDVIIVSGDKDLTQLATDQVTVYITRKGMTDIEKYTPAHIEEKYGLSALQIIDM
KGLMGDASDNIPGVPGVGEKTAIKLLKEYGSVEALYEKIEDMKKSKMKEKLVENEEQAKL
SKKLATIFTEAPIDITLEDLNYPGPNEEELLNVWQELSFKSLIEKSDFQVEVKETAELHF
DIVQEVTEDMLKDVMAVHVEIENEHYHTCRVLGFAFTDGEKTFYLSFDAMQQNKTIKSWL
EDETKKKYMSDSKAAQAILNRVGINLRGVEFDMLLASYIVNPAISGDDIATLAKEFGYTD
VQANETIYGKGAKWTVPTESDLAEHVSRKAFAIWSVQPIVEEKLKENEQFELYYDLELPL
ASILGAMESKGIKVDIPTLEKMGEDLEQKISALEKEIYELADEKFNINSPKQLGVILFEK
LGLPVVKKTKTGYSTAADVLEKLQSEHKIVQYILDYRQLAKLKSTYIEGLIKEVHREDSK
VHTRFQQALTSTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEEGWVLFAADYSQIELRV
LAQMSNDENLVEAFNEGMDIHTRTAMDVFHVSEDEVTSNMRRAAKAVNFGIVYGISDYGL
SQSLNITRKEAGEFIEKYLESFPGVKEYMDTIVQEAKLKGYVTTILNRRRYLPDITSRNF
NLRSFAERTAMNTPIQGSAADIIKKAMIDMDARLKEEGLKSKLLLQVHDELIFEAPKEEI
EILERIVPEVMEHAIELAVPLKVDFNYGYTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaaattgttattactagatggaaatagtttggcatatcgagcgtttttt
gcgttgcctctactagccaacgacagtggaattcatacaaatgctgtatatggatttact
acaatgcttcaaaaaatagtagaagaagagaaaccaacaaaaatgcttgttgcttttgat
gcggggaaaacaaccttccgtcatgaatcatacggagaatataagggcggtcgtcagaaa
actccaccagagctatccgagcaatttccatatataagaaagttgattgatgcttatcaa
atcaagcgttatgaaaaggaactatacgaagcggatgatattattggcacccttgcaaaa
caagctgaaaacgaacagatggatgtcattattgtttctggtgataaagacttaacacag
ctagctaccgatcaagtgaccgtttatattacacgtaaagggatgacggatattgaaaaa
tatacgccagcacatattgaagaaaagtacggactctctgcccttcagattatcgatatg
aaaggtttaatgggggatgcttcagataatattccaggtgtaccgggcgttggtgaaaaa
acggccataaaattattaaaggaatacggttctgtagaagccctatatgaaaaaattgaa
gatatgaaaaagtccaaaatgaaagaaaagcttgttgaaaatgaagagcaagcaaagctt
tcaaaaaaactggcgactattttcacggaagcaccaattgatattacactcgaggatttg
aactatccaggtccaaatgaagaagagcttttaaatgtatggcaggagctttcttttaaa
tcattaatcgaaaaaagtgacttccaagtagaggtaaaagaaacagctgaattacacttc
gacattgtacaagaagtgacggaggatatgttaaaggatgtaatggccgttcatgttgag
attgaaaatgaacactaccatacatgccgtgttttaggttttgcctttacagatggagaa
aaaaccttctatctttcctttgatgcaatgcagcaaaataaaaccattaaaagctggctg
gaagatgaaacaaagaaaaaatacatgtcggatagcaaggcagctcaagctatcttaaac
cgtgtaggtatcaatctacgtggagtagaatttgatatgctgctggcatcgtatattgta
aaccctgcgatttcaggtgatgatattgcaacgcttgcaaaagagttcggctatacagat
gtccaagcaaatgaaacgatttatggtaaaggcgcaaaatggacggttccaacagaatct
gatttagctgagcatgtcagccgtaaagcctttgctatttggtcagtacagccgattgtt
gaagaaaagttaaaagaaaatgaacagttcgagctctattatgatttagagcttccactt
gcatcgattcttggcgcaatggaaagcaaaggaatcaaagttgatattccgacccttgaa
aaaatgggtgaagatttggaacagaaaatttcagctcttgaaaaagagatttacgagctt
gcagacgagaaatttaatataaattctccaaaacaattaggtgttattttatttgaaaaa
ttaggtctgcctgtagtaaagaaaacaaagacaggctattcaacagctgctgatgtcctg
gagaagctgcaaagcgagcacaaaatcgttcaatatatcctagattatcgtcaattagct
aaattaaaatcaacctatatcgaaggacttattaaggaggttcatcgcgaggatagcaag
gtgcatactcgcttccaacaagcactaacttcaacgggtcgattaagctcaacagatcca
aaccttcagaatatccctattcgtcttgaagaaggtcgaaaaattcgacaagcgtttgtc
ccttcagaagagggatgggtattgtttgcggcagattactcacaaatcgaattgcgcgta
ctggctcaaatgtctaatgatgagaatttggtggaagcttttaatgaaggaatggatatt
catacccgaactgcaatggacgtattccatgtgtcagaagatgaagtcacttcgaatatg
cgtcgtgccgcaaaagcggttaattttgggattgtatatggcatcagtgactatggactg
tcacaaagtttaaatattacacgtaaagaagccggagaatttattgagaaatatttagaa
agcttcccgggtgtaaaagaatatatggatacaattgtgcaggaagcgaagttaaaggga
tatgtaacaacgatcttaaatcgtcgccgttatttaccagatattacgagcagaaacttt
aacctgcgtagttttgcagagcgtactgccatgaacacgccaattcaaggaagtgcagca
gatattattaaaaaagcaatgatagatatggacgctcgcttaaaagaagaaggcttaaag
tcaaaactattattgcaagtacacgatgaattgatttttgaagcaccaaaagaggaaatt
gaaattttagaaagaattgtaccagaagtaatggagcatgcaattgaacttgcggttccg
ttaaaagtagatttcaactatggctatacatggtacgatgcaaaataa
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