Lysinibacillus sp. SGAir0095: C1N55_14115
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Entry
C1N55_14115 CDS
T06028
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg03030
DNA replication
lyg03430
Mismatch repair
lyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1N55_14115
03430 Mismatch repair
C1N55_14115
03440 Homologous recombination
C1N55_14115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyg03032
]
C1N55_14115
03400 DNA repair and recombination proteins [BR:
lyg03400
]
C1N55_14115
Enzymes [BR:
lyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1N55_14115
DNA replication proteins [BR:
lyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1N55_14115
DNA repair and recombination proteins [BR:
lyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1N55_14115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Herpes_UL51
Motif
Other DBs
NCBI-ProteinID:
QCR33249
UniProt:
A0A4P8SB23
LinkDB
All DBs
Position
complement(2851227..2854310)
Genome browser
AA seq
1027 aa
AA seq
DB search
MTVVYPQIRTSADLLKSTIRMEELIPFLQSQEAIACAMVNTKLYGLLPFWYALKKAGIHP
VVGLSIEVEFTEEVTLPILIYAKNNEGYQNLLKISSSISIREDEKIPWRWLAAYSKGCAA
VISNDFDQWISESSLGYMQQAARTFQTDLYFGIARSGGVISPNEQRVFNLSKNLNVRCMA
ISECLFLKREDNFAYKVARAIETGVKLSEAIHSKHEQQYVPTATEWQNWYQDHPDLLENS
RQLMLSCQVELTYDKHFMPKFPLQPGQTSEKVLTEMAIIGLKERLQTNSPSETYLNRLQY
ELQVITTMGYADYFLIVADFMNFAKKANILTGPGRGSSASSLVAYCLNITQVDPIKYGLL
FERFLNPERITLPDIDIDFVDTKRQEVIQYVANKYGKQYVAQIITFGTLSAKAVARDVAR
MFNFESETLAMISKLIPNKIGITLQEAYDSSEHLRTWVEAEQIRKTWFLAAKKLEGLPRN
ASTHAAGVVLSPMPLVDVVPIEKGHDDIYLTQWPMQEVEQVGLLKMDFLGLRNLTILENI
RQSIYYTHKKWIDFNQIPFDDEKTFQLLGQGDTTGIFQLESDGMKNALREIAPTEFLDIV
AVNALYRPGPMDFIPVYARRKAKREQVLMPHPILEQILQETYGVIVYQEQIMQIAHVFAG
FTIGQADLLRRAVSKKKREVLEQQEYAFVKGAVSNGYPENIAKEVYELIVRFADYGFAKS
HAVAYSFISYQMAYLKANFPANFYAALMTNAIGNQEKLFQLILEARNKGIDVLRPSIRKS
QRVFTVEQENIRFSLSAIKGVPTPLLQKIVAIRKFKEQPFEDIFDLAVSISAAHFTRKVI
EPLIKSGALDDFGKDRATLLATIDAAGKHASLVRPTEEENDLFASDSLIFGKPKYVEAHQ
IPDKMKLQFEKEALGFYLSEHPVALERKKWNDASTTTKGLFQVRPNSFVKLVGMVEGIRQ
IRTKKGELMAFIQLQDEYGTISATLFPQSYNEVIGWIKEDQIVYVEGVLEFRNGNSQIKV
KTMKNSQ
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
gtgacagtcgtatatccacaaatacgaacaagtgcagatttattgaaaagtacgattcgt
atggaagagctcatcccttttttacaatcccaagaggcaatagcttgtgcaatggttaat
acgaaattgtacgggcttttgcctttttggtatgcgttaaaaaaagctggtattcatcca
gtagttggtttgtctattgaagttgaatttactgaggaagtaacactgccaatacttatc
tacgctaaaaataatgagggttatcagaatctattaaaaatcagcagcagtatatcaatc
cgggaggatgaaaagattccatggcgctggttagcagcttattctaaagggtgcgcggca
gtaatttcaaatgactttgatcaatggataagtgaaagctctttgggatacatgcagcag
gcagccaggacctttcaaactgatttatattttgggattgctcgcagcggaggggtaatt
tcaccaaatgagcaacgggtatttaacctcagcaagaatctcaacgttagatgtatggct
atttcagaatgcttatttttaaagcgtgaagataattttgcttacaaggtggccagagcg
attgaaacaggtgttaagctgagtgaagcaatacatagtaagcatgaacaacagtatgtc
cctacagcaacggagtggcagaattggtatcaagatcaccccgatttactggagaatagt
agacagttgatgttgagctgtcaggtggagctaacttacgataaacatttcatgccgaaa
ttccccttacaaccagggcaaacgtcggaaaaggttcttactgaaatggctattatcgga
ttgaaggaacggttacaaacaaatagtccatcagaaacgtatctaaatcgtttacagtat
gaattacaagttattactacgatggggtatgctgattattttttaattgttgcggatttc
atgaattttgctaaaaaagcgaatatcttgactggacctggtcggggttcgtcggcaagt
tcacttgtcgcttattgtttaaatatcactcaggtagatcctataaaatatggtctatta
tttgagcgctttttaaatccagaacgaattacacttcctgatatcgatattgatttcgtt
gatacgaagcgtcaagaggttattcaatatgtagctaataaatatggaaagcaatacgta
gcccaaattataacttttggtacattgtccgcaaaggctgttgctagagatgttgcccgg
atgtttaactttgaaagtgaaactttagctatgatatctaaattaataccaaataaaatt
ggtatcactcttcaagaagcctatgattcctcagaacatctacggacatgggtggaagca
gaacaaattcgtaaaacttggtttttggcagcgaaaaagctggaaggtttacctaggaat
gcatcaacccatgcagccggagtagtactaagccctatgcctttagttgatgtagtgcct
attgaaaaaggccacgatgatatttatttaacacagtggccaatgcaggaggttgaacag
gtaggattattgaagatggattttttaggcctgcgtaatttgactattttagaaaatata
cgacagtcaatctattatacacataaaaagtggattgattttaaccaaatcccattcgat
gacgagaagacttttcagttattagggcagggtgataccacaggaatattccagcttgaa
tcagatggaatgaaaaatgcattaagggagattgcaccaacagaattcttggatattgtg
gctgttaatgccctgtatcgtccgggtccaatggattttattcctgtctatgcaagaagg
aaagcaaaacgtgagcaagtcttaatgccgcatcctatacttgagcaaattttacaggaa
acatatggtgttatcgtttaccaagagcagattatgcaaattgcccatgtattcgcaggt
tttacgattggccaggcagacttgctaagaagagctgtaagtaaaaagaaaagagaagta
ttagaacaacaagaatatgcttttgtgaagggtgcagtttcgaatgggtaccctgaaaat
atagcaaaagaagtgtatgagttaatcgttcgatttgcggattacggttttgcaaagagt
catgcggtggcctatagctttatctcctatcaaatggcctatttgaaggcgaatttccct
gcaaacttctatgcagctttaatgacaaatgcaataggtaatcaagaaaagctattccaa
cttatattagaagcaagaaataaaggaatagacgttttaagaccatcaatccgcaaaagt
caaagagtatttacagtcgaacaagaaaatattcgttttagcctatcagccataaaaggt
gtaccaacacctcttttacaaaaaatagtagccattcgaaagtttaaggagcaacccttt
gaagatatttttgatttggcagtatctataagtgcggcccactttactcgaaaagtaatt
gaaccactgatcaaatcaggtgccttagatgattttggaaaggacagagccacactttta
gccacaattgatgcagcaggaaagcatgcttcacttgtccgaccaactgaagaggaaaat
gatttatttgcatcagatagcttaatatttggtaagcctaaatatgtggaagctcatcaa
ataccggataagatgaagcttcaatttgaaaaggaagcacttgggttctacttatcggaa
catccagtggcattagaaagaaaaaaatggaatgatgccagtacaaccactaagggacta
tttcaggtgcgtcctaatagctttgtaaaattagtgggtatggttgaagggatacgccaa
attcgcacgaaaaaaggggagttaatggcctttattcagcttcaggacgagtatggaact
atttctgcaacactctttccacaaagttataatgaagtcattggatggattaaagaagat
caaatagtatatgttgaaggtgttttagaattccgaaatggaaattcgcaaataaaggta
aaaacgatgaaaaatagtcaatag
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