Lysinibacillus sp. SGAir0095: C1N55_17750
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Entry
C1N55_17750 CDS
T06028
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lyg
Lysinibacillus sp. SGAir0095
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lyg03009
]
C1N55_17750
Enzymes [BR:
lyg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C1N55_17750
Ribosome biogenesis [BR:
lyg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C1N55_17750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
PrmA
Cons_hypoth95
RrnaAD
TRM5-TYW2_MTfase
TPMT
Methyltransf_11
Methyltransf_15
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
QCR33866
UniProt:
A0A4P8SA87
LinkDB
All DBs
Position
complement(3590704..3592068)
Genome browser
AA seq
454 aa
AA seq
DB search
MVAPVKKNDRRTVYIEDLTHDGNGVAKVDGYPLFIQGALPEEKVEVHVLKTLKNYGFAKI
VDIIKESPDRVKAPCIYFGKCGGCQLQHLSYEGQLKWKENMVRNVMKRLGKIDAPVLPVK
GMQDPWNYRNKSQIPFSMTETGPIAGFYKSKSHEIVDMERCLIQVSEADAMMANLKKKLM
EIGVQPYNEASHQGMLRHVVVRKGHATGKVMIVLVTNKHKFPQKDEAVALIQKLVPNVTS
IVQNINIEKTNVIFGNETVTLWGKDFIEDTIGGVRFEISARSFYQVNPVQTEVLYKQALD
YAQLTGDERVIDAYCGIGTISLFLAQKAKSVMGVEIVEQAIEDAKRNSALNGFTNTYFEA
GPAEEVIPRWYADGKEADVLVVDPPRKGCDEALLTTIIEQKPNRVVYVSCNPATLARDLR
VMEDGGYKTMEIQPVDMFPQTTHCEAVAWLELVL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaccagttaagaaaaatgatcgtagaacagtttatatagaagatttgacacat
gatggcaatggcgtggctaaggttgatgggtatccattgtttatccaaggggctttgcca
gaagaaaaggttgaagttcatgttttaaaaacattaaaaaattacggctttgcgaaaatc
gtagacattattaaagaatcgcccgacagagtgaaggcaccgtgtatttattttgggaaa
tgtggtggctgccagcttcagcatttatcctatgaaggacagttaaaatggaaggagaac
atggttcgcaatgtaatgaaacgactagggaaaatcgacgcgcctgtattacctgtaaaa
ggcatgcaggatccttggaattaccgaaataagtcgcagattccattctcaatgacggaa
acaggccccattgcaggcttttacaaatcaaaatcgcatgaaattgtggatatggaacgt
tgcttaattcaggtaagtgaagcagatgccatgatggcgaacctgaaaaaaaagcttatg
gaaatcggagtgcagccttataacgaagcgtctcatcaggggatgctacgccatgtggta
gttcgtaaaggtcatgcaacagggaaggtcatgattgttcttgtcacaaataaacacaag
ttccctcaaaaagacgaggcagttgcattaatccaaaagcttgtaccaaacgttacgtcg
attgttcaaaacattaatattgaaaaaacgaatgtgatttttggaaatgaaacagtcaca
ctttgggggaaagatttcatcgaggatacaattgggggcgtacgttttgagatttcagcg
cgctccttctatcaagttaacccagttcaaacagaagtcttgtataaacaagcgctagat
tacgcacagctaactggagatgaacgagtaattgatgcctactgtggtatcggaacaatt
tctctattcttagcgcaaaaagccaaatcggttatgggtgttgaaatcgtagagcaagca
atagaagacgcgaaacgcaattcagcattaaatggcttcactaacacttattttgaagca
ggcccagcagaagaagtcatcccacgctggtatgcagatgggaaagaagcggacgtacta
gttgtcgaccctccacgtaagggctgtgacgaagcgttattaacaacaatcatcgaacaa
aaaccaaatcgtgtagtttatgtttcatgtaacccagcaacgctagctcgtgatcttcgt
gtcatggaagatggcggctacaaaacaatggaaatccagccagtggacatgttcccgcaa
acgacgcactgtgaagcagtcgcgtggttagagttagtattgtaa
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